Pelagibacterium flavum: OF122_04170
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Entry
OF122_04170 CDS
T08676
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pem
Pelagibacterium flavum
Pathway
pem00061
Fatty acid biosynthesis
pem00071
Fatty acid degradation
pem01100
Metabolic pathways
pem01212
Fatty acid metabolism
pem02024
Quorum sensing
pem04146
Peroxisome
Module
pem_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
OF122_04170
00071 Fatty acid degradation
OF122_04170
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
OF122_04170
09145 Cellular community - prokaryotes
02024 Quorum sensing
OF122_04170
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pem01004
]
OF122_04170
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pem04147
]
OF122_04170
Enzymes [BR:
pem01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
OF122_04170
Lipid biosynthesis proteins [BR:
pem01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
OF122_04170
Exosome [BR:
pem04147
]
Exosomal proteins
Exosomal proteins of breast milk
OF122_04170
Exosomal proteins of breast cancer cells
OF122_04170
SSDB
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Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UYQ72970
UniProt:
A0ABY6IQT3
LinkDB
All DBs
Position
complement(828893..830605)
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AA seq
570 aa
AA seq
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MNKQVSAPHPWVTAYPEGIEWDTAIDTTPVHEQLLASCAKMGDATALDFLGATTSFRRLG
EQVNALAGALQSELGVKKGDRVALLMPNTPFYVISYFAVLRIGATVVNCNPLYSLSELSH
IVSNSGATVLITLDLKATFPKAEKLVGEGHVKKLVVAHFPDALPGLKKILFSLFKANDIV
KTANSPAAPSIISFEELITKGKIPTSVQIDPEKDVAVQQYTGGTTGIPKGAMLSHANIAA
NMSQIDKWGCGIFYPPSKIVAVLPFFHIFAMTVCMNVPLCSGAQVVMLPRFEMKAFLSLM
KRTRPNVLPTVPTLLHALATKDIATAEILAPIEVAISGGAGLPSETREAFGKKSDAILAE
GYGLTEASPVVTCAALRVPSKPGSIGLPLPATDVRFVDLEDPEQEVPQGERGELVLKGPQ
VMLGYFDNPEATKSAFTANGYLRTADVGYIDEDGYVFLVDRIKDLIICSGFNVYPRAIED
AIYQHPAVDETNVIGVKDEYRGEAPVAYVKLKDGQSLTEGGLKDFLKDRLSKLEMPREII
FRDELPKTMIGKLSKNDLREDYEKNVKAGE
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaagtcagcgccccccatccttgggtcacagcctatcccgagggtatcgaa
tgggacacggccatcgacacgaccccggtgcacgagcaactcctggcatcctgcgccaag
atgggcgatgccacggccctcgactttctgggcgccaccacatccttccggcggctgggc
gagcaggtcaatgccctggccggcgcgctgcaatccgaactcggggtcaaaaagggtgat
cgggttgcgctcctgatgcccaacacgccgttttacgtgatctcctattttgccgtgctg
cgcatcggcgccactgtcgtcaactgcaacccgctctattccctgagcgagctcagccac
atcgtgtccaattccggcgcaaccgttctcatcaccctcgatctcaaggccaccttcccc
aaagccgaaaagctggtcggcgaaggccatgtcaaaaagctcgtcgtcgcccatttccca
gatgccctgccgggactgaaaaagattctcttttcgctgttcaaggccaacgacatcgtc
aagaccgccaattcgccggccgccccttccatcatctcgtttgaagaactgatcaccaag
ggcaagatccccacttcggtccagatcgatcctgaaaaggatgtcgccgtccagcaatac
accggcggcacgacaggcatccccaagggcgccatgctcagccacgccaatatcgccgcc
aatatgagccagatcgacaaatggggctgcgggatattctatccgccctcaaagattgtc
gccgtcctgccgttcttccatatctttgcgatgaccgtgtgcatgaacgtgccgctgtgc
tcgggcgcccaggtcgtcatgctcccgcgctttgaaatgaaggcttttctgtccctcatg
aagcgaaccagacccaacgtcctccccaccgtccccaccttgctgcacgcgcttgccacc
aaggatattgcgaccgccgaaatccttgcgcccattgaggtggcgatttcgggcggcgcg
gggcttcccagcgaaacccgcgaagccttcggcaaaaagtccgatgccattctcgccgaa
ggttatggtctgaccgaggcctcgccggtcgtcacctgcgcggctttgcgtgtaccctcc
aaacccggatcgatcggcctgcctcttccggccaccgacgtgcgctttgtcgatctcgaa
gatcccgaacaggaagtcccccagggcgaacgtggagaactcgtgctcaagggcccccag
gtcatgctcggctatttcgacaaccccgaagcgaccaagtccgccttcaccgccaacggc
tatctgcgcaccgccgatgtcggctatatcgatgaggatggctatgtcttcctagtcgac
cgcatcaaggacctcatcatctgctcgggtttcaacgtctatccgcgagccatcgaggat
gcgatctaccagcaccctgccgtggacgaaaccaatgtgatcggggtaaaggacgaatat
cgcggcgaagcaccggtcgcctacgtaaagctcaaggacggacaatcgttgaccgaaggc
ggcctcaaggacttcctcaaggaccgcctctccaagctcgaaatgcctcgcgagatcatt
ttccgcgacgagttgcccaaaaccatgatcggcaagctctcaaagaacgatctgcgcgag
gattacgaaaaaaatgtcaaagccggggaatag
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