Pelagibacterium flavum: OF122_04180
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Entry
OF122_04180 CDS
T08676
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pem
Pelagibacterium flavum
Pathway
pem00071
Fatty acid degradation
pem00280
Valine, leucine and isoleucine degradation
pem00310
Lysine degradation
pem00362
Benzoate degradation
pem00380
Tryptophan metabolism
pem00410
beta-Alanine metabolism
pem00640
Propanoate metabolism
pem00650
Butanoate metabolism
pem00907
Pinene, camphor and geraniol degradation
pem00930
Caprolactam degradation
pem01100
Metabolic pathways
pem01110
Biosynthesis of secondary metabolites
pem01120
Microbial metabolism in diverse environments
pem01200
Carbon metabolism
pem01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
OF122_04180
00650 Butanoate metabolism
OF122_04180
09103 Lipid metabolism
00071 Fatty acid degradation
OF122_04180
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
OF122_04180
00310 Lysine degradation
OF122_04180
00380 Tryptophan metabolism
OF122_04180
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
OF122_04180
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
OF122_04180
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
OF122_04180
00930 Caprolactam degradation
OF122_04180
Enzymes [BR:
pem01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
OF122_04180
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
OF122_04180
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
OF122_04180
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
UDPG_MGDP_dh_N
Methyltransf_31
AlaDh_PNT_C
Pyr_redox_2
ThiF
Pyr_redox
ApbA
Motif
Other DBs
NCBI-ProteinID:
UYQ72972
LinkDB
All DBs
Position
833595..835562
Genome browser
AA seq
655 aa
AA seq
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MAQADTPQTRHWDFSIDVEQIGWLTLDVQDNSVNVLSREVISELEKLVGHIERLGQAGSL
VGVVLLSGKSGFIAGADISEFDQMSDPAILPEALRRTHGVFQRIEDLKIPFVCGISGFCV
GGGLELALACHYRIAVNDDGTKLGFPEVNLGIFPGFAGTGRSIRQAGPVDAMQLMLTGKI
LRASQARKLNLVDKLVRHRDMLRWEGRTAVLSKRKSEPAPFTKRAMALGPIRKRVADKMR
EEVGKKAPKNHYPAPYALIDLFEKYGDDPKQMIAHEIDAFVPLMASPTAQNLRRVFFLSE
SLKRLGVKGKDKPKFVRVHVVGAGVMGGDIAAWCAYRGMAVTLQDMDMDRIKPALDRAKK
LFKKRLKTRQAVDAAMARLEPDVEGKGIARCDVLIEAVVEKLEVKQQIFSNAEKQLKPNA
IMATNTSSIELERIAESLDNPNRLIGLHFFNPVAQLPLVEVIRSTLNDDEAIRVGASFVL
AIGKSPVVVKSAPGFLVNRALMPYMLEAIDRVEKGESPEQLDAAAVAFGMPMGPIELMDT
VGLDVGAFVAKELGQKVPEDSKFAKLVSDGKLGRKSGQGFYKWVDGKAQKEKAPAHANLE
GLGRDLVQPLVDTAEVIVSEGVVESADMADIGMILGTGFAPFLGGPLKAREDGRA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
ttggcgcaagctgatacgccacagacccgacactgggacttttcaatcgatgtcgagcag
atcggctggctgacgctggacgttcaggacaattcggtcaacgtgttgagccgggaggtg
atttccgagctcgagaaactggtcggccatatcgaacgattggggcaggcgggcagcctt
gtgggcgtcgtcctgttgtcgggaaaatcgggctttattgccggtgccgacatttccgaa
ttcgaccagatgagcgatccggccatccttcctgaagccctgcggcggacccatggggtg
ttccagcggatcgaggatttgaaaattccgttcgtgtgcggcatttcggggttctgtgtc
ggcggcggactggaactggctctggcctgtcattaccgcattgcggtcaatgacgatgga
accaagctgggctttccggaggtcaatctggggattttcccgggctttgccggaaccggc
cgctcgatccgccaggccgggccggtcgatgccatgcaattgatgctgacgggcaagata
ttgcgcgcgtcgcaggcaagaaagctcaacctcgtcgacaagctggtgcggcaccgcgac
atgctgcgttgggagggccgcacggcggtgctttccaagcgcaaatccgaacccgcgccg
ttcactaaacgcgccatggcactgggcccgatccgcaagcgggtggccgacaagatgcgt
gaggaagtgggcaagaaggcgccgaaaaatcactatcccgcaccctatgcacttatcgat
ctgttcgagaaatatggcgacgatcccaagcagatgatcgcccatgagatcgatgccttc
gtgccgctgatggcctcaccgacggcgcagaatttgcggcgggtcttctttttgtccgag
agcctgaaacggctcggcgtcaaaggcaaggataagcccaaatttgtccgcgtccatgtg
gtgggcgccggggtgatgggtggagatattgctgcgtggtgcgcctatcgtggcatggcg
gtgacgctccaggacatggatatggaccgcatcaagccggcgttggaccgggccaaaaag
ctgttcaagaagcgtctcaagaccagacaggcggtcgacgcggcaatggcccggctcgag
cccgatgtcgagggcaaagggattgcccggtgcgacgtgctgatcgaagcggtggtggaa
aagctcgaggtcaagcagcagatcttttccaatgccgaaaagcaattgaagcccaatgcg
atcatggcgaccaatacgtcatcgatcgaactcgagcgcatcgccgagtcactggacaat
cccaacaggctgatcgggctgcatttcttcaacccggtggcgcaattgccgctggtcgag
gtgatccgctcgacgctcaatgacgatgaagcgatccgggttggagcgtccttcgttctg
gcgatcggcaagagcccggtcgtggtcaagtccgcgccggggttcctcgtcaatcgggcg
ctcatgccctacatgctcgaagctatcgacagggtggaaaagggcgaaagtcccgaacag
ctcgatgcggccgcggtcgccttcggcatgcctatggggccgatcgaactcatggatacc
gtgggcctcgatgtcggcgcgtttgtggccaaggaactgggccagaaggtgcctgaggac
agcaagttcgcaaagctggtttcggacggaaagctcggccgcaagtccggccaggggttt
tacaaatgggtggacggcaaggcgcaaaaggaaaaggcgccggctcacgccaatcttgaa
gggctggggcgtgatctcgtccagccgctcgtcgatacagcagaagttatcgtttccgag
ggcgtggttgaaagcgccgacatggccgatatcggcatgatcctggggaccggctttgcg
ccgttcctgggcggaccgctcaaggcacgtgaggacggaagggcttaa
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