Pelagibacterium flavum: OF122_04680
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Entry
OF122_04680 CDS
T08676
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pem
Pelagibacterium flavum
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pem03009
]
OF122_04680
Enzymes [BR:
pem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
OF122_04680
Ribosome biogenesis [BR:
pem03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OF122_04680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UYQ73065
LinkDB
All DBs
Position
complement(936975..937985)
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AA seq
336 aa
AA seq
DB search
MAGSQLQQDRHDATVLETEAGTRLDAFLAARFPLFSRNRIKDLILTGAVSVDGTTNDVPK
YRVRTGESITLAAPEPVEAEPQPQDIALNILFEDEYLIVIDKPAGMVVHPAPGNEDGTLV
NALIHHCGDSLRGIGGVKRPGIVHRLDKDTSGVMVAAKTELAHNGLAAQFADHGRTGPLE
RAYFAFVWGVPNPLVGTVETMIGRDPHNRLKQSVLPREGREAITHFRVESRFSNEKWSIA
QVKCQLETGRTHQIRVHMAHIGHPLIGDGVYGSAFATKINTVPEQVRQAIRSLNRQALHA
AILGFAHPVTGETLRFESPLPPELADLATKLAPFAL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcagtcagctccaacaggataggcacgacgccaccgtcctcgaaaccgaggcc
gggacgcggctcgatgcatttctggctgcccgcttccccctcttttcgcgcaaccgcatc
aaggacttgatccttaccggtgcggtcagcgtggatgggacgaccaacgatgtgcccaaa
tatcgtgtcaggaccggcgagtccatcactctcgccgcccccgaaccggtcgaggccgaa
ccccagccccaggacatcgcgctcaacatcctcttcgaggacgaatatctcatcgtcatc
gacaagcccgcaggcatggtggttcatcccgcaccgggcaatgaggacggaaccctcgtc
aacgccctcatccaccattgcggcgatagcctgcgcggcattggcggggtcaaacgcccc
ggcatcgtccataggctcgacaaggacacctcgggcgtcatggtcgccgccaagaccgaa
ttggctcataacgggctcgccgcccagtttgccgatcatggccgcaccggcccactggaa
cgtgcctacttcgctttcgtctggggcgtccccaatcccttggtcggcaccgtcgaaacc
atgatcggtcgcgatccccacaaccggctcaagcaatcggttctcccccgagagggacgg
gaagctatcacccactttcgcgtcgaaagccgcttcagtaacgaaaaatggtcaatcgca
caggtcaaatgccagctcgagaccggccgcacccatcagatccgcgtgcatatggcccat
atcggccatccgctgatcggagacggcgtctatggttcagcctttgcaacaaagattaat
acggtgcccgaacaggtccggcaggccatcaggtccttgaaccggcaagcgcttcacgcc
gcaatccttggctttgcccatccggtgacgggcgaaacgctcaggttcgaaagcccactc
ccccctgaactcgcagacctcgcaacgaagctggcgccttttgcgttatag
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