Pelagibacterium flavum: OF122_05405
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Entry
OF122_05405 CDS
T08676
Symbol
cydB
Name
(GenBank) cytochrome d ubiquinol oxidase subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
pem
Pelagibacterium flavum
Pathway
pem00190
Oxidative phosphorylation
pem01100
Metabolic pathways
pem02020
Two-component system
Module
pem_M00153
Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
OF122_05405 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OF122_05405 (cydB)
Enzymes [BR:
pem01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
OF122_05405 (cydB)
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Motif
Pfam:
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-ProteinID:
UYQ73200
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All DBs
Position
1087381..1088529
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AA seq
382 aa
AA seq
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MDFIPIDYETLRLIWWALLGVLLIGFAIMGGMDLGMGALLPFVARTDDERRVMLNLQGPT
WEGNQVWLVLGGGAIFAAFPPLYAVSFSGFYLAMIVILFALILRPVGFKYRGKVTDPRWR
SAWDCALFIGGFVPALILGVAVGNALLGAPFDLDNTLRPSYLGNFFGLLTPFALLCGLVS
LSMLVVMGASVLAARTEGALAERAAQYGQWAALAAMGLFALAGLWIAFGIEGYVITSAVV
TDQASNPLAKTVAREVGGWMANYGHYPWMMVAPALGFLGMAGAAAGIKTYPGAMTIISAG
LGVFGIVATAGLSMFPFLLPSSHNPVASLTVWDATSSHLTLFIMLIATLIFMPIILAYTS
WVYKVMSGPVTNTSLGKNPNAY
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatttcattccaattgattatgaaacgctgcgccttatctggtgggcgctgctgggc
gtgcttctgatcggctttgccatcatgggcggcatggatctgggcatgggggcgctgttg
ccctttgtggcccggaccgacgacgagcggcgcgtaatgctcaacctgcagggcccgacc
tgggagggcaatcaggtgtggctggtgcttggcggcggcgcgatctttgcggcctttccg
ccgctttatgcggtgagcttttcaggcttttacctggcgatgatcgtgatcctgtttgcc
ctgatcctgcggcccgtgggcttcaaatatcgcggcaaggtcaccgatccgcgctggcgc
agtgcctgggattgtgccttgttcatcggcggtttcgtgccggcgctgatcctgggcgtt
gccgtgggcaatgcgctgttaggcgcgcccttcgatctcgataacactttgcggccctcc
tatctgggcaatttcttcgggcttttgacacccttcgcgctgttgtgcgggctggtgagc
ctttccatgctggtggtgatgggcgcgagcgtgctcgcggcacgcaccgagggggcgctt
gcagagcgggccgcgcaatatggccaatgggcggcgctggcggccatggggctgttcgct
ctcgccgggctgtggatcgccttcgggatcgagggttatgtcatcaccagcgcggtggtg
accgatcaggcgtcgaacccgctggccaagaccgtggcgcgcgaagttggcggctggatg
gccaattatggacattatccctggatgatggttgcgccggccctgggctttctgggcatg
gcgggggcggctgccggcatcaagacgtatccgggtgccatgacaatcatatcggcgggg
ctgggcgtgttcgggatcgtggcaacggcggggctttcgatgttcccgttccttctgccg
tcctcgcacaacccggtggcgagcctgactgtgtgggacgcgacatcgagccatctgacg
ctgttcatcatgctgatcgccacgctgatcttcatgccgatcatccttgcctacacaagc
tgggtgtacaaggtgatgagcggcccggtgaccaacaccagccttggcaaaaaccccaac
gcctactga
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