Pelagibacterium flavum: OF122_05850
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Entry
OF122_05850 CDS
T08676
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K23169
UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:
6.3.2.53
]
Organism
pem
Pelagibacterium flavum
Pathway
pem00550
Peptidoglycan biosynthesis
pem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OF122_05850 (murD)
Enzymes [BR:
pem01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.53 UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase
OF122_05850 (murD)
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Motif
Pfam:
Mur_ligase_M
MurD-like_N
Nitro_FeMo-Co
Motif
Other DBs
NCBI-ProteinID:
UYQ73285
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Position
complement(1189706..1190980)
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AA seq
424 aa
AA seq
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MHIDGPVLLYGAGREARSTAAFLRRTYPDLELFVTTDDGVAELNGASFIPPDEANQVSRF
GTIVKSPGVSLYKPIFEAARAAGVKITSNLNIWGAHFREGRTVVAISGTKGKSTTATLVH
LMLEKSGVDVVLAGNVGIPPLDAADSAQTVVLELSSYQTADIDFAPDIAAISNLYPEHVD
WHGGLDAYYRDKLNLIAKGPKFVAIGPQAATVERVISTIPATTKRIPPLDIDLGDEILMA
AMNSRLKGAHNHDNARLAAAIALAAGATREGIFKGIEAFIPLPHRLEELMVGDILFVDDS
ISTTPEATKVALAAYKGRKIALIAGGHERQQDYADLANLMGLTSVVMLCSLPVTGQRLAQ
AVRENTPIPIAECSTLDEAMQALANAGHVFDTVILSPGAPSYNQFKNFEERGDRFKALAR
QHFS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcacattgacggtcccgttcttttatatggcgctggccgcgaggcccggtccactgcc
gcattcctgcgccgcacctatcctgacctcgaactgttcgtgaccaccgatgacggtgtg
gccgaactcaatggcgcaagcttcatcccgcccgatgaggcaaatcaggtttcgcgcttc
ggaaccatcgtcaagagccccggcgtgtcgctctacaagccgattttcgaggcagcccgc
gccgctggggtcaagatcacatccaacctcaacatctggggcgcccacttccgcgaaggc
cgcacggtcgttgcgatttccggcaccaagggaaaatctaccacggcaacgctggtccat
ctgatgctggagaaatccggggtcgatgtggtgctggctggcaatgtgggcatccccccg
ctcgacgccgccgacagcgcccagacggtggtgctcgaactctcgtcctaccagacggcc
gatatcgactttgctcccgacatcgccgcgatctccaacctctatcccgagcatgtggat
tggcacggggggctcgatgcctattaccgcgacaagctcaatttgatcgccaaaggtccc
aaatttgtggcgatcggcccgcaggctgccaccgtggagcgcgtcatcagcaccattccc
gccacgaccaaacgcattccgccgctcgacatcgatcttggcgacgaaattctgatggcc
gcgatgaattcgcgcctcaagggtgcgcacaaccacgacaatgctcgtctggccgcggcc
attgcgctggctgccggggccacaagggagggaattttcaagggcatcgaagccttcatt
cccctgccccaccggctcgaggaattaatggtcggcgacattcttttcgtcgatgactcc
atttcaaccacccccgaagccaccaaggtggcgctcgccgcctacaagggcagaaaaatc
gccctgattgcgggcgggcacgagcgccagcaggattatgccgatctggccaacctgatg
ggactgaccagtgtcgtgatgctctgctcactgccggtcaccggccagcggcttgcccag
gccgttcgcgagaacactccgatccccattgccgaatgctcgacgctcgatgaggccatg
caggcgctcgccaatgccggccacgtcttcgataccgtcatcctctcgccgggcgcgccg
agctacaaccagttcaagaatttcgaagaacgcggcgaccggttcaaagcccttgcccgc
cagcatttcagctag
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