Pelagibacterium flavum: OF122_08160
Help
Entry
OF122_08160 CDS
T08676
Name
(GenBank) hypothetical protein
Organism
pem
Pelagibacterium flavum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Apolipoprotein
Baculo_PEP_C
ApoLp-III
Blo-t-5
GnsAB_toxin
Cep57_MT_bd
Motif
Other DBs
NCBI-ProteinID:
UYQ73716
LinkDB
All DBs
Position
complement(1645939..1651308)
Genome browser
AA seq
1789 aa
AA seq
DB search
MANKSTPPKDDPAALAFSAVENALKDSVFSMDDKPARKVESQPASREPRREQRREAPTNT
ERLRAADKIAAQASSVANDDRTTAASALYALQSRASNAPIWFAITTSLLWLIGVGLIAAL
RYGPRFTEGLSIAEFVQSLDFAALAAITALPILAMISIAFLVRRAQDLRLAAASMTQAAM
RLTEPESAAAHKIATVGQAVRREVNAIGDGLERALSRAGELEVMVHNEVTALERTYSDNE
TRMRQLIEELASQRDAVITNSERMREAIAAVHGNVTNDLNEIGSSITERLKTTGSEVTQA
ISDRATAMTESIETAGTTIETTFERRSQSFAETIEGRTADLIMALDDSSSRLDGTLTDKA
EALATAIDTSTDRLDTVLTSSASSVQIALEGHSSMVEAALGETTGQLNALFETRTADLTN
ALDSRNQILEDTLGSGVSRIETAFEGRAEAIAKVLGSGVEDVEAAFAGRADALAAALGTG
VAEVRAAFEGRAEALADALGVGVESIEAAFGRRTDALTEALDQRAREVTENVDARINSLV
NSLDSHTISLSAAIEEKSATIGEVLKGSTESILVDFSRRSEALGSSFAAMGETVSNGIAS
RAEEAEATLSRITNRLDETFSIQSNALQSQIESMSLRLDGALEESTERTRETLTKAGTDT
LAQLNARVDEISVILDNRIGQVDTIVGEKGEKLVSSLDAHTTEIADRSNRLETLLDDKGR
ALASALETGGESFGAMADAKTSALTEALDARAQAITSAVDLRTEALSSALDARADALNSS
LDIRTEALTSAFDGRAEQIGSALDGRAEEIASVIESRTGNLTSAIDSRTEQLTAALDSRT
EQFNSALDGRTETFTSALDGRTEQFTSALDSRSEQLTSALDARTTQLDTALAARTTQLDD
TLAERANAMNSMLDITSSQLSETLTERTRYMGGIIDESAERLERSIGDRARGLEESLDEK
SRHMAESIADRTSELTTAVDASGERIRATIDGSLVNVTETMETRSNQVSELIESKVAELN
SNIGREIDVAVEKISGAESGVTARIGEAASSVGQSARDAADLVEARLTEARSAITEMVDD
RLGTLPEAITTRAEITAERLAGLNEAIHGTITDSMRDLESGADRIESTLTGSIHSAIGQS
MADLESGASRIETVLNDKLANVTANISADVEQTAMRMDAVVRKAMEELKVATVHIEDLVE
VRAVHTADELGRKASEINRIVSEHTDRFAELIDTKQNQLTNALGSQTNLLRAALEANARD
AEDIMSESSNRIQHEITDSLRKLNDANLLLQRVLEASTGNLARLQGNVGEQTQAYTAAVR
DAMTGTEQAGTMMSQHVEALQNTMSAMLEQFGQLSGKLNSETDGFTTAAANLAEVSNSTM
DTLENRRGAMESLAEGFAARTDEIDNRLRGFAQSIAETVNQTERRLIAARKAMEDALAST
SDAVTGQISTIGDLASGEGQRASDALRQTQADLLADIERAYADATRRFGDTADAMRMTAS
QLGQELEATRNELQRSVLDLPEETRASAAAMRRVVAEQIEALSELNAIVRAQPGTHEVSS
RTTPRTPSARLAAAEPTRRAEPAPQPVRQPEVRQPEVRQPEVRQPEPTRQQAPVATQARP
AETQKSPSERLNEALTQSRSNQPQPAPAAAPAAPQEGGWLRDVLRNASASQQAGTQRPLN
LSSLTEDIARAIDSDALTAAWNRYQDGESGAFNRRLYTITGQSTFDEVRRKLQRDPEFSR
TASAYMNEFEQLLGEAANGPNGMQQTFNQLVSNRGKVYTMLAHASGRLN
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaagtcgaccccacccaaggacgatccggcagcgctggcgttttctgctgtc
gaaaacgcactcaaggactcggtcttttcaatggatgacaagccagcccgcaaagtagag
agccagccggcaagccgcgaacccaggcgcgaacagcgccgtgaggcgcccaccaacacc
gagcgtttgcgcgccgccgacaagatcgccgctcaggcctcctcggtcgccaatgacgat
cgtaccaccgccgcctccgcgctgtatgccctccagtctcgtgcatccaatgcgccgatc
tggttcgccatcaccacgtcccttctctggctgatcggcgttggcctgatcgccgccctg
cgctacggcccgcgtttcactgaagggctctcgatcgccgaatttgtgcaaagccttgat
tttgcagcgctcgcagcgatcaccgccctgcccattctcgcgatgatttccatcgccttc
cttgtgcgccgtgcccaggatctgcgccttgccgccgcctcgatgacccaggccgccatg
cgtctgaccgagcccgaatcggctgccgcacacaagatcgccaccgtcggacaggccgtg
cgccgcgaggtgaacgccatcggcgacgggctcgaacgcgccctctcgcgcgccggcgag
cttgaagtgatggtccacaatgaagtgaccgcactcgagcgcacctattcggacaacgaa
acgcgcatgcgccagctcatcgaagaactggccagccagcgcgacgcggtgatcaccaat
tccgagcgcatgcgcgaagccatcgcggccgtgcatggaaacgtcaccaatgaccttaac
gagatcggctcgtcgatcaccgagaggctcaagacgaccggcagcgaagtcactcaggcg
atttccgaccgcgcaacggccatgaccgaatcgatcgaaacggccggcacgacaatcgaa
accacgttcgaacgccgctcgcagagcttcgccgaaaccattgagggccgcaccgccgac
ctcatcatggcactcgacgacagctccagccgcctcgatggcacgctgaccgacaaggcc
gaagcgctcgccaccgccatcgatacatcgaccgatcgcctcgatacggtgctgacctcc
agcgcttccagcgttcagatcgccctcgagggccattcgagcatggttgaagctgcattg
ggcgaaacgaccggccagctcaacgccctgtttgaaacccgaaccgccgatctcaccaac
gcgctcgacagccgcaaccagattctcgaagacactctgggctctggggtttcgcgcatt
gaaaccgcattcgagggtcgcgccgaagcgattgccaaggttctcggcagcggcgtcgag
gatgtcgaagccgcgtttgcgggccgagccgacgcgctggcggcagcgctgggaaccggc
gtggcagaagtccgggcagcattcgagggccgggccgaagctctcgcagacgccctgggc
gttggcgtggaaagcatcgaggccgccttcggacgccggaccgatgccttgacagaggcg
ctcgatcagcgggcccgcgaggtcaccgagaatgtcgatgcgcgcatcaactcgctggtg
aattcgctcgattcccacaccatctcgctttcggcagccatcgaagaaaagtcggctacc
atcggcgaggttctcaagggctcgaccgaatccattctcgtggatttctcgcggcgttcc
gaagcgctcggatcgagctttgccgcgatgggcgagaccgtctccaatggcatcgcaagc
cgcgccgaggaagcagaggcaaccctgagccggatcaccaatcggctcgacgaaaccttc
tctatccagtccaacgccctccagagccagatcgaatccatgagcctgcgcctcgacggt
gcgctcgaggaatcgaccgagcgcacgcgcgagaccctcaccaaggccggcaccgatacg
ctggcccagctcaatgcccgggtcgatgagatttcggtcattctcgataaccgcatcggt
caggtcgacacaatcgttggtgaaaagggcgaaaagctcgtttcctcgctcgatgcgcac
accaccgaaatcgcagaccggtcaaaccgtctggaaacactgctcgacgacaagggccgc
gcccttgccagcgcgctggaaaccggcggcgagagctttggcgccatggcggacgccaag
acctccgccctcaccgaagccctcgacgcgcgcgcgcaagccatcacgtcggccgtggac
ctgcgcaccgaggcgctctcttcggccctcgacgcccgcgcagacgcgctcaattcgagc
ctcgatatccgcaccgaggcgctcacatcggcctttgatggccgtgcagagcagatcggt
tccgccctcgatggccgcgccgaagaaatcgcttcggtcatcgaaagccgcactggcaat
ctgacatcggcaatcgacagccggaccgaacagctgaccgcggcgctcgacagccgcacc
gagcagttcaacagcgcgctcgatggacggaccgagacctttacctctgcgctggatggc
cggaccgaacagttcacctcggcgctcgacagccgctccgagcagcttacctccgctctc
gatgcacgcaccacccagctcgatacagcgctggcggcccgcaccacacagctcgatgac
acgctggccgagcgcgccaacgccatgaattcgatgctcgacatcacctcgagccagctc
tcggaaacgctgaccgagcgcacccgctacatgggtggcatcatcgacgaatccgccgag
cgcctcgaacgctcgatcggcgatcgggctcgcgggctcgaagaatcactggatgaaaaa
tcccgccacatggcggagtcgatcgccgaccggacaagcgaactcaccaccgctgtcgac
gcctcgggcgagcgcatccgcgccacgatcgatggcagccttgtcaacgtcaccgaaacg
atggaaacccggtccaaccaggtgtccgagctcatcgaaagcaaggtggccgagctcaat
tccaatatcggccgcgagatcgacgtcgctgtcgaaaagatcagcggcgcggaatccggc
gtcaccgccaggatcggcgaagccgcatcctcggtcggccagagcgcccgcgacgctgcg
gacctggtcgaagcgcgtctcaccgaagcgcgcagcgccattaccgagatggtcgacgat
cgtctgggcaccctgcccgaggcgatcaccacccgcgccgaaatcaccgccgaacggttg
gccggtctcaatgaggccatccacggcacgatcaccgattccatgcgtgacctcgagagc
ggcgccgaccggatcgaatccaccctcaccggttcgatccacagcgccatcggccaatcg
atggccgacctcgaatccggcgccagccgcatcgagaccgttctcaacgacaagctcgcc
aacgtcacggccaacatttccgccgacgtcgaacagacggcaatgcgcatggacgccgtg
gttcgcaaggccatggaagagctcaaggtggccactgtccatatcgaggatctggtggaa
gtgcgcgccgtccataccgcagacgagcttggccgcaaggcgtccgagatcaaccgaatc
gtgtccgagcataccgacaggttcgccgaactcatcgacaccaagcagaaccagttgacc
aacgctctgggcagccagacaaatctgctgcgcgccgcgcttgaagcaaacgcccgcgac
gccgaagacatcatgtcggaatcgtccaaccgtattcagcacgaaatcaccgactcgctg
cgcaagctcaacgatgccaatctgctgctccagagggttctggaagcctcgaccggcaac
cttgcccgcctgcagggcaatgtcggcgaacagacccaggcctacaccgccgccgtccgc
gatgcgatgacgggcaccgaacaggccggcaccatgatgagccagcacgtcgaagcgctg
cagaacaccatgtctgcaatgctcgagcagttcggccagctgtcgggtaaactcaactcc
gagactgacgggttcaccacggccgcggccaatctggccgaagtctccaactccaccatg
gatacgctggaaaatcgccgtggggccatggagtcgctcgccgaaggctttgccgcgcgc
accgatgaaatcgacaaccgcctgcgcggcttcgcccagtcgatcgccgaaaccgtcaac
cagaccgagcgtcgcctgatcgctgcccgcaaggcgatggaagacgcgctcgcctcgaca
tcggatgccgtgaccggccagatttcgaccattggcgatctcgcctcgggcgaaggccag
cgcgccagcgacgccttgcgccagacccaggccgatctgctcgccgatatcgagcgcgct
tacgccgacgcgacccgccggttcggcgatactgccgacgccatgcgcatgaccgcttcc
cagctcggccaggaactcgaagcgacccgcaacgaattgcagcgctcggtgctggatctg
ccggaggaaacccgggccagcgcggctgcaatgcgtcgcgtcgtcgccgaacagatcgaa
gcgctgtcggaactcaacgccatcgtgcgggcccagccgggcacccacgaagtgtcgagc
cgtaccacgccgcggacgccttcggcacggcttgccgctgccgagccgacccgtcgcgcc
gaaccggcgcctcagcctgtgcgccagcctgaggtgcgtcagcctgaggtgcgtcagcct
gaggtgcgtcagcccgagccgacgcgccagcaggccccggttgccactcaggcccgtccc
gcagagacgcagaaatcaccgtccgagcgcctcaatgaagcgctgacccaatcccgtagc
aaccagccgcaaccggcgcccgccgctgctcctgctgctccgcaggaggggggatggctc
cgcgacgtcctgcgcaacgcttcggcaagccagcaggccggcacgcagcgcccgctgaac
ctttcgagcctgaccgaagacatcgcccgcgccatcgacagtgatgcgctcacagcggcc
tggaaccgctatcaggatggggagtcgggcgccttcaatcgccggctctacaccatcacc
gggcagtcgacattcgacgaagtgcgccgcaagctccagcgcgatcccgaattctcgcgc
accgcgagcgcttatatgaacgagttcgagcagttgcttggagaggcggccaacggccct
aacggcatgcagcagaccttcaatcagctcgtgagcaatcggggcaaggtctatacgatg
ctcgcccatgcaagcggccggttgaactaa
DBGET
integrated database retrieval system
