Pelagibacterium flavum: OF122_08895
Help
Entry
OF122_08895 CDS
T08676
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
pem
Pelagibacterium flavum
Pathway
pem02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OF122_08895 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pem02000
]
OF122_08895 (xylF)
Transporters [BR:
pem02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
OF122_08895 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
ABC_sub_bind
Motif
Other DBs
NCBI-ProteinID:
UYQ73857
LinkDB
All DBs
Position
1784502..1785542
Genome browser
AA seq
346 aa
AA seq
DB search
MKTFAAALLGTTVLFGLAGGALAQDITVGVSWSNFQEERWKTDEAAIQAQLDEMGASYIS
ADAQSSASKQLTDIESLIAQGADALIVLAQDTDAIQPAIAAAVAEGIPVIGYDRLIENSD
AFYITFDNKGVGRLQAESVYAVQPTGNYVFIKGSSTDPNADFLHEGQLEVLQDAIDAGDI
VNVGEAYTDGWLPENAQANMEQFLTANNNEVDAVVASNDGTAGGAIAALAAQGLDGAVPV
SGQDGDHAALNRIALGTQTVSVWKDSRELGAKAAEIAVELAGGAALSDIEGSVMFDGGPN
GVEMTSLFLAPVAITQDNLDVVIDAGWVSKDVVCQGVAAGSVAACD
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactttcgcagctgcccttttgggcacgactgttcttttcggtctggccgggggc
gcgctggctcaggacatcaccgttggcgtttcctggtccaatttccaggaagagcgctgg
aagaccgacgaggcggccattcaggcccagcttgacgaaatgggcgccagctacatttcc
gccgacgcgcagtcttcggcatccaagcagctcaccgatatcgagagccttatcgctcag
ggcgctgacgcgctgatcgttctggctcaggataccgatgccatccagccggcaatcgcc
gccgctgtcgcggaaggtattccggtgatcggctatgaccgcctgatcgaaaattctgac
gcgttctacatcacattcgacaacaagggcgtcggccgtctgcaggctgaatcagtctat
gctgtgcagccgactggcaactacgtcttcatcaagggctcgagcaccgatcccaacgcg
gacttcctgcacgaaggtcagcttgaagtgctccaggatgccattgacgccggcgacatc
gtcaatgtcggcgaagcctataccgatggctggcttcccgagaacgcccaggcgaacatg
gaacagttcctgaccgccaacaacaacgaagtcgatgctgtcgttgcgtccaatgacggt
accgctggtggcgcaattgctgctctcgccgctcagggcctcgacggcgccgtgccggtt
tcgggccaggatggtgaccatgcagcccttaaccgtatcgctctgggcacccagaccgtt
tcggtctggaaggacagccgtgagcttggcgccaaggcagccgaaatcgcggttgaactg
gccggcggcgcagcgctttccgacatcgaaggatcggtgatgttcgatggtggcccgaat
ggcgtcgaaatgacttcgctgttccttgctcctgtcgccattacgcaggacaatctcgac
gtcgtcatcgacgccggctgggtcagcaaggatgtcgtctgtcagggcgttgccgctggt
tcggtcgccgcttgcgattga
DBGET
integrated database retrieval system
