Pelagibacterium flavum: OF122_09135
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Entry
OF122_09135 CDS
T08676
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
pem
Pelagibacterium flavum
Pathway
pem00362
Benzoate degradation
pem01100
Metabolic pathways
pem01120
Microbial metabolism in diverse environments
pem01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
OF122_09135 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
OF122_09135 (pcaH)
Enzymes [BR:
pem01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
OF122_09135 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
DUF4198
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
UYQ73903
UniProt:
A0ABY6ITF8
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All DBs
Position
1826550..1827302
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AA seq
250 aa
AA seq
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MNNRLSNSRAEAGAFMERDHSLHPPAFTPGYKSSVLRAPKQSLISFASTLSEKTGPAFGH
NMLGEYDNDLIINFAKPGEEAIGQRIVVHGRVIDQNAKPVPNVLVEFWQANAGGRYRHKR
EGYRAPLDPNFGGFGRTITDDDGYYWFRTIKPGPYPWPNGVNDWRPAHIHFSLFGTGFAQ
RLVSQMYFEGDPLIKICPIVNTISDPDAIDRLVARLDMNNTIPMDSRAYRFDIVLRGRRS
TFFENRKEGN
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaataaccgcttgagcaattcgcgcgccgaggcaggcgccttcatggagcgcgatcat
tccctgcatccccccgcctttacgccgggatacaagtcttcggtcctgcgggcgcccaaa
caatcgctgatcagctttgccagcacgctgagcgagaaaaccggccccgcattcggccac
aacatgctgggtgaatacgataacgatctcatcatcaactttgccaagcccggcgaggaa
gccatcggccagcgcatcgtggtgcatggccgggtcatcgaccagaatgccaagcctgtt
cccaacgtgctcgtcgagttctggcaggctaatgccggtgggcgctatcggcacaagcgc
gagggctaccgcgcgccactcgatcccaatttcggcggcttcgggcgcacgataaccgat
gatgatggctattactggttccgcaccatcaagcccggcccctatccctggcccaacggg
gtcaacgactggcggccggcccatatccatttctcgctgttcggcaccggcttcgcccag
cgtctcgtcagccagatgtatttcgaaggcgatccgctcatcaagatctgtcccatcgtc
aacacgatcagcgatcccgatgcgatcgaccggttggtggctcggctcgacatgaacaac
accatcccgatggattcgcgtgcctatcggttcgatatcgtgttgcgtggccgccgctcg
accttctttgaaaaccgcaaggagggcaattga
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