KEGG   Pelagibacterium flavum: OF122_09225
Entry
OF122_09225       CDS       T08676                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pem  Pelagibacterium flavum
Pathway
pem02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pem00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    OF122_09225
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pem02022]
    OF122_09225
Two-component system [BR:pem02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   OF122_09225
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 AAA_16 Mg_chelatase AAA_3 AAA_22 AAA ATP-cone FleQ
Other DBs
NCBI-ProteinID: UYQ73920
UniProt: A0ABY6IXK9
LinkDB
Position
complement(1846939..1848300)
AA seq 453 aa
MAERQTVVFVDDEEPMRHAVQQWLGVAGHDAQSFGSAQSALEHISAGLNGIVLTDLRMPS
MDGMALLRRILEIDPDIPVILMTGQGDIESAVEAMRIGAYDFIEKPFDPERLAQTVRRAT
EKRRLVLENRYLAAAAPADTLRNRILGTSREIERLREAVSEIAATDVSVVLYGETGSGKD
LVARCLHDLGRRAKGNYVAVNCSAIPDTMVETEMFGHEAGAFTGAAGRRIGKIEHASGGS
LLLDEVESMPLAMQAKLLRALQERVIERLGSNTSVPVDFRTIAATKRDLKAESATGAFRS
DLYFRLSVVELNIPPLRDRRDDIPLLFEFFAAEAARSHNRETRPLKGATLDALMRHDWPG
NVRELRNVAERHALGLSSFAAADNSRPIDLADVMPLAQQLEAYERRIIERALADSGGRIS
EVIEKLGVPRRTLNEKMTRLGIRRREADDQYGQ
NT seq 1362 nt   +upstreamnt  +downstreamnt
atggctgaacggcagaccgtcgttttcgtcgatgacgaagagccaatgcgccatgcggtg
cagcaatggctcggggtcgccggacatgatgcgcagagcttcggatcggcccaatccgcg
ctcgaacatatttcagcgggcctcaacggtatcgtcctcacagatttgcgcatgccatcc
atggatggcatggctctgttgcgccgcatcctggaaatcgatccggacatccccgtgatc
ctcatgaccggtcagggcgacattgaaagcgctgtcgaggcgatgcgtatcggtgcatat
gatttcatcgaaaagcccttcgatcccgaacgcctggctcagaccgtacgccgcgcaacc
gagaaacgtcgccttgtactggaaaaccggtatctggcagcggcagcaccggccgacacg
ttgcgcaacaggattctgggcacctcgcgcgaaatcgagcgccttcgcgaagcagtatca
gaaatcgcggcaaccgacgtcagcgtcgtgctctatggggaaaccggatcgggcaaggat
ctcgtggctcgatgtcttcatgatctgggtcgacgcgcgaagggcaattacgtggccgtc
aattgctccgccattcccgatactatggtggaaactgaaatgttcgggcacgaagccggt
gcctttactggcgccgccggccgccggatcggcaagatcgagcacgcaagcgggggcagc
cttctgctcgatgaagttgaatcgatgcctttggcaatgcaggccaagctcttgagagca
ttacaggaacgcgtcatcgaacgacttggctccaacacatccgttcccgtcgatttccgg
acaattgcggcgacaaagcgcgatctgaaggccgaaagcgccacgggagccttccgttcc
gatctttatttccgtctctctgttgtcgagctcaacatcccgcccctgcgcgaccgcaga
gatgacatcccacttcttttcgagtttttcgcggcagaggcggcccgcagccacaatcgc
gagacccggccccttaaaggagccacactcgacgccctgatgcggcatgactggccgggc
aatgtgcgtgagttgcgcaatgttgccgagcggcacgcgctgggtcttagcagttttgcg
gccgccgataacagccggcccatagatctcgcggacgtcatgcctctcgcccagcaactc
gaggcctatgaacgtcgcatcatcgagcgcgcccttgccgatagcggcggccgcatcagc
gaagtgatcgaaaaacttggcgtaccccggagaaccctcaacgaaaaaatgacgaggctc
ggcatcaggagacgcgaggccgacgatcaatatgggcaataa

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