Pelagibacterium flavum: OF122_09775
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Entry
OF122_09775 CDS
T08676
Symbol
gatB
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
pem
Pelagibacterium flavum
Pathway
pem00970
Aminoacyl-tRNA biosynthesis
pem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OF122_09775 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pem03029
]
OF122_09775 (gatB)
Enzymes [BR:
pem01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
OF122_09775 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
OF122_09775 (gatB)
Mitochondrial biogenesis [BR:
pem03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
OF122_09775 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
UYQ74025
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All DBs
Position
1942336..1943820
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AA seq
494 aa
AA seq
DB search
MTLVDTRTPTPKYFISGATGDWEMVIGMEVHAQVTSESKLFSGSSTKFGNAPNSNVSFVD
AAMPGMLPVINEECVRQAVRTGLGLKAKINKRSVFDRKNYFYPDLPQGYQISQFKDPIVG
EGKVMLDLGEDGEVEIGIERLHLEQDAGKSIHDQHPNMSFVDLNRSGVALMEIVSKPDLR
SADEAKAYLSKLRTILRYLGTCDGNMEQGSMRADINVSVRRPGGEFGTRCEIKNVNSVRF
AGQAIEYEARRQIDILEDGGVIDQETRLYDPKTGTTRSMRSKEEAHDYRYFPDPDLLPLE
FDDAFIEMLAENLPELPDEKSARLVKDYGVTHYDASVLVSDRRYADFYEDVARGRDGKLA
ANWVINEFFGRLSKEGLSIDDSPMDAHQLGGIVELISKGEISGKIAKDLFEIVWTEGGDP
AELVEQRGMKQVSDTGAIEKIVDEIIAGNPGQVEAVKTKPGLLGWFVGQVMKQTGGKANP
QAVNEILKAKLGLE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgacactggtcgatacacgcacgcccaccccgaaatatttcatctccggcgccactggc
gattgggaaatggtgatcggcatggaggtgcatgcgcaggtaacctcggaatcgaagttg
ttctctggctcgtccacaaaattcggcaatgcgcccaattccaacgtgtcattcgtcgat
gccgcaatgccgggcatgctgcctgtcatcaacgaggagtgcgtgcggcaggccgtgcgc
accgggctggggctcaaggcgaagatcaacaagcgctcggtgttcgaccggaagaactat
ttctatcccgatctgccccagggctatcagatttcccagttcaaggacccgatagtgggt
gagggaaaggtcatgctcgacctcggtgaagacggcgaggtcgaaatcggcatcgagcgt
ttgcatctcgagcaggatgccggcaagtcaatccacgatcagcaccccaatatgagcttt
gtcgatctcaaccgctcgggcgtggcgctcatggagatcgtctccaagcccgatctgcgt
tcggcggacgaggccaaggcttacctctcaaagctgcgcaccattctgcgctatctgggc
acctgcgacgggaatatggagcagggttcgatgcgggcagatatcaacgtttcggttcgc
cgaccgggcggcgaattcggcacgcgctgcgagatcaagaatgtcaattcggtccgcttt
gccggtcaggccatcgaatatgaggcgcgccgccagattgatatcctcgaggatggcggg
gtgatcgaccaggaaacacgcctgtacgatcccaagaccggcacgacccggtcgatgcgg
tccaaggaagaagcgcatgactatcgctatttccccgatcctgaccttttgccgctcgaa
ttcgatgatgccttcatcgaaatgctcgcagagaacctgccggagttgcccgacgaaaag
agcgcccgcctcgtcaaggattatggcgtcactcattacgatgcctcggttctggtctct
gaccgccgctatgccgatttctatgaggacgtcgccagggggcgtgacggcaagcttgct
gcgaactgggtgatcaacgaatttttcgggcgcctctcgaaggaaggtctttccatcgac
gacagtcctatggatgcccaccagctcggcggcatcgtcgagttgatctccaagggcgag
atttcgggcaagatcgccaaggatctgttcgagatcgtgtggaccgagggcggcgatccg
gccgaactggttgaacaacgcggcatgaagcaggtctccgacaccggcgcgatagaaaag
atcgtcgatgaaatcatcgccggcaatcccggacaggtcgaagcggtcaagaccaagccg
ggccttttaggctggtttgttggtcaggtcatgaagcagaccgggggcaaggccaacccg
caggcggtcaatgaaatcctgaaagccaagctgggactggaatag
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