Pelagibacterium flavum: OF122_10055
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Entry
OF122_10055 CDS
T08676
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
pem
Pelagibacterium flavum
Pathway
pem00450
Selenocompound metabolism
pem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
OF122_10055
Enzymes [BR:
pem01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
OF122_10055
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
OF122_10055
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
SelA
Motif
Other DBs
NCBI-ProteinID:
UYQ70431
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Position
2012079..2013296
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AA seq
405 aa
AA seq
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MPFDLATARADFPILEEKIHGKRLVYLDSGASAQKPVQVLDRMDHAYRHEYANVHRGLHT
LANRATEAFEGAREKVRAFLNAERVEEIIFTRSTTEAINLVASSFASPRIGEGDEIVISI
AEHHSNIVPWHFHRERKGAVIKWVDVADDGSFDLDAFTAALTDRTKIVAITHMSNVLGTI
NPAKQIVEIAHARGIPVLIDGSQAAVHTKVDVRDIGADFYVFTGHKLYGPTGVGVLYGKY
DLLAAMQPFLGGGEMIEEVSQDAVTYNAPPHRFEAGTPPIVQAIGLGAAIDYVEAIGRDA
IAAHEHEVAVYAGEQLSRINSLRMFGTAPSKGGIFSFMLENAHAHDVSTILDRYGVAVRA
GTHCAMPLLQRFGVTSTCRASFALYNGKDDVDALVEAIEKAQSFF
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcgatctcgcgacagcacgcgcggattttcccattctcgaggagaaaattcac
ggcaagcgcctggtttatctcgactcgggtgcttcggcgcaaaagccggtgcaggtgctc
gatcgcatggatcatgcgtatcgacacgaatatgccaatgtgcatcggggactgcatacg
ctggccaatcgggcgaccgaagcgttcgagggcgcacgcgagaaagtgcgcgcgtttctc
aatgccgagcgggtcgaagagatcatttttacgcgttcgacgaccgaagccatcaatctg
gtggcgtcctcatttgccagtccgcggatcggggagggggacgagatcgtcatttcgatc
gccgaacaccactccaacatcgtgccgtggcatttccatcgggaacgcaagggcgcggtg
ataaaatgggtggacgtggccgatgatggaagcttcgatcttgatgcctttacggcggcc
ctgacggaccggacgaagatcgttgcgatcacacatatgtcgaacgtgctgggcacgatc
aatccggccaagcagatcgtggagatcgcgcatgcgcgcggtattccggttctgatcgat
ggtagccaggcggccgttcacaccaaggtggacgtgcgcgatatcggggccgatttctat
gtctttaccggccacaagctctatgggccgaccggggtgggggttctttacggcaagtat
gacctgcttgccgcgatgcaaccgtttctgggcggcggggagatgatcgaagaggtttcg
caggacgctgtgacctacaacgctccgccgcacaggttcgaggccggcacgccgccgatc
gtacaggcgatcgggcttggcgcggcgatcgattatgtcgaggccattgggcgtgacgcc
attgcggcccacgagcacgaggtcgcggtttacgcgggcgagcagctgtcgcggatcaat
tccctgcgcatgttcggtaccgcaccgagcaagggcgggattttttccttcatgctcgag
aatgctcatgcccacgacgtttcgacaattctcgaccggtatggtgttgccgtgcgggcc
gggacccattgtgcaatgcccctgctacaaagatttggggttacctctacatgtcgggcc
tcgtttgccctatataatggcaaggacgatgtggacgcgcttgtcgaggctatcgaaaaa
gcgcaatccttcttttga
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