Pelagibacterium flavum: OF122_10425 Help Entry OF122_10425       CDS       T08676                                  Symbol uvrA Name (GenBank) excinuclease ABC subunit UvrA   KO K03701   excinuclease ABC subunit A Organism pem  Pelagibacterium flavum Pathway pem03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:pem00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     OF122_10425 (uvrA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pem03400]     OF122_10425 (uvrA) DNA repair and recombination proteins [BR:pem03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      OF122_10425 (uvrA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       OF122_10425 (uvrA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 AAA_25 BCA_ABC_TP_C nSTAND1 RsgA_GTPase DnaJ_CXXCXGXG AAA_21 AAA_33 CA109-like Motif Other DBs NCBI-ProteinID:  UYQ70499 LinkDB All DBs Position complement(2086157..2089048) Genome browser AA seq 963 aa AA seqDB search MNDISNPNRDIVIRGAKEHNLKNIDVRLPRDKLIVMTGLSGSGKSSLAFDTIYAEGQRRY VESLSAYARQFLEMMQKPDVESIEGLSPAISIEQKTTSRNPRSTVGTVTEIYDYLRLLFA RVGIPYSPATGLPIESQTVSQMVDKVMALEEGTRLYLLAPIVRGRKGEYRKELAELMKKG FQRVKIDGAFYEIEEAPALDKKLKHDIEVVVDRVVVNADIAGRLAESFETALRLADGIAL TEYADQTEEDGSPKRLTFSEKFACPVSGFTIAEIEPRLFSFNNPFGACPVCSGLGTEAKI DPDLVIPDASLSLRDGAVQPWSKTSSPYYLQTLQAVTRHFKASTGTAWQDLPFEVQHAIL FGTDKTKIEFVYDDGLRKYSTQKPFEGVIGNLERRYRETESSAAREDIERYMSAAPCPAC NGYRLKPEALAVKIHGCHIGQVSELSIKGAAEWFSDLPAHLNATQSAIGERILKEIRDRL AFLNDVGLQYLTLSRNSGSLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNARL LDTLRRLRDLGNTVIVVEHDEDAILTADHVLDIGPGAGVHGGQIIAQGTPEDILSHPDSL TGQYLSGRMGIPVPAERRKAKKGRQLSLKGATGNNLKNVSVDIPLGMFVAITGVSGGGKS TLTVDTLYQAIARRLNGARVHPAPHESLTGLELLDKVIDIDQSPIGRTPRSNPATYTGAF THIREWFANMPESKARGYGPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCKG HRYNRETLEVQFKGKSISDVLDMTVDEGAEFFSAVPVIRDKLVTLQRVGLGYVKIGQQAT TLSGGEAQRVKLAKELSKRATGRTLYVLDEPTTGLHFHDVAKLLDVLQQLVDTGNTVIVI EHNLEVIKTADWIIDLGPEGGDGGGEIVAVGTPEQVAESPRSHTGHFLKEIMERRPLRMT AAQ NT seq 2892 nt NT seq  +upstreamnt  +downstreamnt atgaatgacatttccaatcccaatcgcgacatcgtcatccggggtgccaaggagcacaac ctaaaaaatatcgacgttcgcctgccccgcgacaagctgatcgtgatgacagggctttcg ggctcgggcaaatcttcgcttgccttcgataccatctatgccgaaggccagcgccgctac gtcgaaagcctttcggcctatgcgcgccagtttctcgaaatgatgcaaaagcccgatgtg gaaagcatcgaagggctttctccggccatttccatcgagcagaaaaccacatcgcgcaat ccgcgctcgaccgtcggcacggttactgaaatctacgattatctccgcttgctgttcgct cgcgttggcattccctattctccggccaccgggcttcccattgagagccagaccgtctcc cagatggtcgacaaggtcatggcgctcgaggaaggcacccgcctctatttgctggccccc atcgtgcgcggtcgcaagggcgagtaccgcaaggaactcgccgagctgatgaaaaagggc ttccagcgcgtcaagatcgacggcgcgttttacgaaatcgaggaagcccccgcactcgac aagaagctcaagcacgacatcgaagtcgtcgtcgatcgcgtcgtcgtcaatgccgatatc gccggccgccttgcggaaagtttcgagaccgcgctgcgtctggccgacggcattgcgctg accgaatatgccgaccagaccgaggaagacggcagccccaaacgcctgacattctcggaa aaattcgcctgcccggtgtctggctttaccattgcggaaatcgagccgcgcctgttctcg ttcaacaaccccttcggcgcctgcccggtctgttccggccttggcacagaggccaagata gatcctgatctcgtgatccctgacgcctcgctgtcgttgcgcgacggcgccgtccagccg tggtcgaaaacctcttcgccctattatctgcaaacccttcaggccgtcacgcggcacttc aaggcatcgacaggcaccgcttggcaggatctgcccttcgaggtccagcacgccatcctg tttggcaccgacaagaccaagatcgaattcgtctatgacgacggcctgcgcaaatattcg acccagaagccattcgaaggtgtcatcggcaacctcgagcgccgctatcgggaaaccgaa tcctcggcggctcgggaggatatcgagcgctacatgtcagcagccccctgcccggcctgc aatggctatcgcctgaagcccgaggctctggcggtcaagatccatggctgccacatcggt caggtctcggaattgtccatcaagggcgcagccgagtggttttctgatctacccgcccat ctcaacgcgacccagtcggcaatcggcgaacgtattctcaaggaaatccgcgaccggctg gccttccttaacgacgtcgggctgcaatatctgacgctctcgcgcaattccggctcgctt tcgggcggtgaaagccaacgtatccgccttgccagccagatcggctcggggctcaccggc gtgctttacgtgctcgatgagccttctatcggcctgcaccagcgcgacaatgcgcgcctg ctcgatacgctgcgccgcctgcgcgacttgggcaacaccgtcatcgtggtcgagcatgac gaagacgccatcctcaccgccgatcatgtcctcgatatcgggccgggcgccggtgtgcat ggtggccagatcatcgctcagggcacccccgaagatattctctcgcaccccgacagcctg accggacaatatctgtcgggccgcatgggcatccccgttcccgccgagcgccgcaaggcc aagaagggccgccagctctcgctcaagggcgcaaccggcaataatttgaaaaatgtctcg gtcgatatcccgctcggcatgttcgtggccataaccggcgtctcgggcggcgggaagtcc actctgaccgtcgatacgctctatcaggccatcgcccgccgcctcaacggcgcgcgggtg cacccagcgccccacgagagcctcacaggcctcgaactgctcgacaaggtcatcgacatc gaccagagcccaatcgggcgcaccccgcgctccaacccggccacctacaccggtgccttc acccacatccgcgagtggttcgccaacatgcccgaatccaaggcgcgcggttacggcccg gggcgtttctcgttcaacgtcaagggcggccgctgcgaggcgtgccagggcgatggcgtg atcaagatcgaaatgcacttcctgcccgacgtttacgtgacctgcgatgtctgcaagggc catcgctacaatcgcgaaaccctcgaagtccagttcaagggcaagtcgatttccgacgtt ctcgacatgacggtcgatgaaggggccgagttcttctccgcagtgcctgtcatccgcgac aagctcgtcacgctccagcgcgtcgggctaggctatgtcaagatcggccagcaggcgaca accctttcgggtggcgaggcgcagcgcgtcaagctggcaaaggaattgtccaagcgcgcc accggccgcacgctttacgtgctcgacgagcccacgaccggcctgcacttccatgacgtc gccaagctgctcgacgtgctccagcagcttgtcgatacgggaaacacggtcatcgtcatc gaacacaatcttgaagtgatcaagacggccgactggatcatcgaccttgggcccgaaggc ggcgatggcggcggcgaaatcgtcgcggtcggcacccccgagcaggtcgccgaaagtccc cgttcacacaccggccacttcctcaaggaaatcatggagcgtcgtcccctgcgcatgact gcggcccaatag

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