Pelagibacterium flavum: OF122_10475
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Entry
OF122_10475 CDS
T08676
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pem
Pelagibacterium flavum
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pem03032
]
OF122_10475 (gyrA)
03400 DNA repair and recombination proteins [BR:
pem03400
]
OF122_10475 (gyrA)
Enzymes [BR:
pem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OF122_10475 (gyrA)
DNA replication proteins [BR:
pem03032
]
Prokaryotic type
DNA Topoisomerases
OF122_10475 (gyrA)
DNA repair and recombination proteins [BR:
pem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OF122_10475 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
CBM_6
Motif
Other DBs
NCBI-ProteinID:
UYQ74099
LinkDB
All DBs
Position
2098383..2101100
Genome browser
AA seq
905 aa
AA seq
DB search
MPSDIHPISITDEMRKSYLDYAMSVIVSRALPDVRDGLKPVHRRILFSMHEQGYEHNKPY
RKSARVVGDVIGKYHPHSDDAVYMSLVRMAQPFSMRVKLIDGQGNFGSVDGDMPAAMRYT
EARMEKVTGSLLDDLDKDTVDFRDNYDASEREPTVLPARFPNLLVNGGGGIAVGMATNIP
SHNLGEVIDACLAMMDNADITVDELMEIIPGPDFPTAGIIIGKSGIRSAYETGRGSVLMR
GRVTVEEVRKEREALIIHEIPYQVNKATMIEKIAEMVRDKRIEGIADIRDESDRQGMRVV
IEIKRDAVADVVLNQLYRYSMLQTSFGCNFVALNGGKPELMNLQSILQAFLRFREEVITR
RTRFLLNKARDRAHVLVGLLVAVNNVDEVIRLIRSSPDPATARQKLLERDWPASDVMGLI
KLIDDPRHQINDDGTFKLSDEQARAILALTLSRLTALGRNEIGDELNSLGEQIKDYLDIL
RSRERVLGIIRDELNEIKEQYATPRMTQIDEFAGDLDDEDLIAREDMVVTVSHAGYIKRV
PLSTYRAQRRGGKGRSGMSTRDEDFVARLFVANTHTPVLFFSSRGIVYKMKVWRLPVAAP
QARGKALINMLPLEDGERITSIMPLPEDEDSWASLDVMFVTQSGNVRRNKLSDFVEVRQN
GKIAMKLDEGDGIVGVETASESDDILITTAKGQCIRFAITDVRVFKGRDSTGVRGINLAK
GDEVIAMSILRHFDASAEERAAYLKMSRAVRGEAEEAAEVAEGDEEVAGDSPLDQDRYAS
MSAAEQFVLTISEKGFGKRTSSFEYRVTGRGGKGIVAMAVNSRNGNLVGSFPVEDENQLM
LVTNGGQVIRVPVDGIRIVGRSSQGVTIFRTAADEKVVSVERITEPESAEGEEPEDGAEA
SPSEE
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgccctccgacatccacccgatctcgataacggacgagatgcgcaaatcctatctcgat
tacgcgatgagcgtgatcgtgagccgggccctgcccgacgtgcgcgacgggctcaaaccc
gtgcatcgccgcatccttttttcgatgcacgagcagggttacgaacataacaagccctat
cgcaaatcggcccgcgtggtcggtgacgttatcggtaaatatcacccgcattcggacgat
gcggtctatatgtccctggtgcgcatggcgcagccgttctcgatgcgcgtcaagctgatt
gacgggcagggtaacttcggttcggtcgacggtgatatgccggcggcaatgcgctacacc
gaagcgcgcatggaaaaggtcacaggctcgctgctcgacgacctggacaaggatactgtc
gatttccgcgacaactatgacgccagcgagcgcgaaccgacggtcttgccggcgcggttc
ccgaacctgctcgtcaatggcggcggtggtatcgccgtgggcatggccaccaatattccg
agccacaatcttggcgaggtgatcgacgcttgcctggccatgatggacaatgcggacatc
acggtcgatgagttgatggaaatcattcctggaccggactttccgacagcaggcatcatt
atcggcaagtccggcatccggtctgcctatgagacagggcgtggctcggttctcatgcgt
gggcgcgtgacggtcgaagaggttcgcaaggaacgcgaagcgctgatcattcacgagatt
ccctatcaggtgaacaaggcgacgatgatcgaaaagattgccgagatggtgcgcgacaag
cgcatcgaaggcatcgccgacattcgcgacgagtccgaccgtcagggcatgcgtgtggtg
atcgagatcaagcgcgatgccgtggcagacgtggtgctgaaccagctctatcgctattcg
atgctgcagacctcattcggctgcaacttcgtggcgctcaatggcggcaagccggaattg
atgaacctgcagtcgatcctgcaggcgttcctgcggttccgcgaagaggttatcacccgc
cgcacccggttcctgctcaacaaggctcgcgaccgtgcccatgtgctggtgggtctgctg
gtggccgtcaacaatgtagatgaggttatccgtcttatccgttcgtcgccggaccccgca
acggcgcgtcagaagctgttggagcgtgactggccggcgtcggacgtcatgggtctgatc
aagctgatcgacgatccgcgccaccagatcaatgacgacggcaccttcaagctctccgat
gagcaggcgcgtgccattctggcgctgaccctgtcgcgactgacggcgcttggccggaac
gaaatcggcgacgaactcaattcgcttggcgagcagatcaaggattatctcgatattctg
cgctcgcgcgagcgggttctgggcatcattcgtgacgagctcaacgagatcaaggagcag
tacgcgacaccgcggatgacacagatcgacgagttcgccggcgatctggacgatgaagat
ctgatagcacgcgaggatatggtggtgaccgtgtcgcacgccggttacatcaagcgggtg
ccgctttcgacctatcgcgcgcagcgcaggggaggaaaggggcgttcgggcatgtcgacg
cgcgacgaggatttcgtcgcgaggctgttcgtcgccaatacgcacacgccggtgctgttc
ttttcctcgcgcggtatcgtctacaagatgaaggtctggcgattgccggtggccgcgcca
caggcgcgcggcaaggcgctgatcaacatgctgccgctcgaagacggtgagcgcatcaca
tcgatcatgccgctgcccgaggacgaggacagctgggctagcctcgatgtgatgtttgtc
acccaatcgggcaatgtgcgccgcaacaagctctcggacttcgtcgaggtgcgccagaac
ggcaagattgccatgaagctcgatgagggcgacgggatcgtcggcgtcgagacggcctcg
gaaagtgacgatatcctgatcacgacggcgaagggccagtgcatccgctttgcgataacc
gatgtgcgtgtcttcaaggggcgcgattcgaccggtgttcgaggtatcaacctggcaaag
ggcgacgaagtgatcgccatgtcgatcctgcgccatttcgatgcttcggcggaagagcgt
gcggcgtacctgaagatgagccgcgccgtgcgcggtgaggccgaagaggcggcggaggtc
gcagagggcgacgaagaggttgcgggcgattcaccgcttgaccaggatcgctatgcctca
atgagcgcggccgagcagttcgtcctgacgatctccgaaaagggctttggaaagcgaaca
tcgtcgttcgagtaccgggtgaccgggcgtggcggcaagggtatcgttgccatggcggtc
aacagccgcaatggcaacctggtcggctcattccctgtggaagacgaaaaccagctcatg
ctggtgaccaatggcgggcaggtgatccgcgtgccggtcgatggtatccgcattgtcggg
cgttcgagccagggcgttacgattttccgcaccgcagcggacgaaaaagtggtctcggtc
gagcgtataacggagccggaaagcgctgagggcgaagaacccgaagacggcgcggaggca
tccccgagcgaagagtga
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