KEGG   Pelagibacterium flavum: OF122_10760
Entry
OF122_10760       CDS       T08676                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
pem  Pelagibacterium flavum
Pathway
pem02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pem00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    OF122_10760
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pem02022]
    OF122_10760
Two-component system [BR:pem02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   OF122_10760
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_16 AAA_5 FleQ
Other DBs
NCBI-ProteinID: UYQ70562
UniProt: A0ABY6IIY6
LinkDB
Position
complement(2153791..2155167)
AA seq 458 aa
MARDILIVDDEEDIRELIAGILEDEGYEPRQASDADGALNEIAKRRPNLVYLDIWMQGSR
LDGLQLLDVLQADHPDLPVVMISGHGNVETAVSAIRRGAYDYIEKPFKIDRLLLITQRAI
EASKLRTEVADLKERTGDETELVGVSGAIAQVRSLIEKSAGTRSRVFISGGAGTGKGMCA
RLLHFKSPRAAGPFIEINASLYAPDEIPVVLFGREVREKNGLRTEVGALERAHGGTLYLS
EVTSLPLEAQTSLLRALVENKFTRVDGHGPVPVDVRIVSSSSQNVASLIEEGKFRTDLFH
RLSVVPLQLTSLRERREDIPALVSLFVAQLSRMHNLPRFLFGDDAIAVLQGQDWPGNARQ
LRNAIERLLILVRDQQPEDGIITASMLPSDISEVLPTIGDTDSSAHLMSLPLRDAREVFE
RQYLIAQIERFGGNISKTAEFVGMERSALHRKIKSLGL
NT seq 1377 nt   +upstreamnt  +downstreamnt
atggctcgtgacattctgattgtggacgacgaagaagatatccgggagctgattgccgga
attctcgaagatgaaggctacgagccgcgacaggcctccgatgccgacggcgcgctcaac
gagattgccaagcgccgccccaatctggtttatctcgatatctggatgcagggctcgcgc
ctggacggcttgcagctgctcgatgtcctgcaggccgatcaccctgatcttcccgtggtt
atgatctcgggccacggcaatgtggagaccgcggtctccgccattcgccgaggcgcgtat
gactatatcgagaaacccttcaagatcgatcgtctgctgctgatcacgcagcgggccatt
gaagcgagcaaactcaggacggaagtcgctgacctcaaggagcgaaccggagatgaaacc
gagctggtcggcgtctccggcgccatcgcccaggtccgttccctgatcgaaaaatcggcc
ggtacgcgttcgcgcgtcttcatttccggcggagcaggcaccggcaagggcatgtgtgcg
cgtctcctgcacttcaagagcccgcgcgctgccggccccttcattgaaatcaatgcctcg
ctctatgcgccagatgaaatccccgtcgtgctgttcgggcgcgaagtccgcgaaaagaac
gggttgcgcaccgaagttggcgccctcgagcgcgctcatggcggcacactctacctgtcc
gaagtcacttcgctccctctggaggctcagacctccttgctgcgcgccttggttgaaaac
aagttcacccgcgtcgacggccatggtccggtacccgtcgatgttcgcatcgtctcatcc
agttcccaaaacgtcgccagcctgatcgaggagggcaagttccgcaccgatctgttccac
cggctctcggtcgtaccgctccagctcacctctttacgtgagcgccgcgaggatattccg
gccctggtcagccttttcgttgcgcagctttcacgcatgcacaacctgccgcgctttctg
ttcggggacgacgcgatcgctgtgcttcaggggcaggattggcccggcaatgcacgccag
ctgcgcaacgccattgagcgcctgctgattctggtgcgcgatcagcagcccgaggacggg
atcatcacggcgtccatgctgccatccgacatttccgaagtgctgcccaccattggcgac
accgattcatcggcccatctgatgagtctgcccctgcgtgacgcgcgcgaggttttcgag
cgccaatacctgatcgcccagatcgagcgatttgggggcaatatctcaaaaaccgcggaa
tttgtgggcatggagcgaagcgccttgcaccgcaagatcaagtcgctcgggctttag

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