KEGG   Pelagibacterium flavum: OF122_10810
Entry
OF122_10810       CDS       T08676                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pem  Pelagibacterium flavum
Pathway
pem00010  Glycolysis / Gluconeogenesis
pem00020  Citrate cycle (TCA cycle)
pem00260  Glycine, serine and threonine metabolism
pem00280  Valine, leucine and isoleucine degradation
pem00310  Lysine degradation
pem00380  Tryptophan metabolism
pem00620  Pyruvate metabolism
pem00630  Glyoxylate and dicarboxylate metabolism
pem00640  Propanoate metabolism
pem00670  One carbon pool by folate
pem00785  Lipoic acid metabolism
pem01100  Metabolic pathways
pem01110  Biosynthesis of secondary metabolites
pem01120  Microbial metabolism in diverse environments
pem01200  Carbon metabolism
pem01210  2-Oxocarboxylic acid metabolism
pem01240  Biosynthesis of cofactors
Module
pem_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pem_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pem_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pem_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pem00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    OF122_10810 (lpdA)
   00020 Citrate cycle (TCA cycle)
    OF122_10810 (lpdA)
   00620 Pyruvate metabolism
    OF122_10810 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    OF122_10810 (lpdA)
   00640 Propanoate metabolism
    OF122_10810 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    OF122_10810 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    OF122_10810 (lpdA)
   00310 Lysine degradation
    OF122_10810 (lpdA)
   00380 Tryptophan metabolism
    OF122_10810 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    OF122_10810 (lpdA)
   00670 One carbon pool by folate
    OF122_10810 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pem04147]
    OF122_10810 (lpdA)
Enzymes [BR:pem01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     OF122_10810 (lpdA)
Exosome [BR:pem04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   OF122_10810 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 GIDA HI0933_like FAD_binding_3 FAD_oxidored NAD_binding_8 Lys_Orn_oxgnase DAO AlaDh_PNT_C Amino_oxidase Thi4 2-Hacid_dh_C 3HCDH_N Ntox47
Other DBs
NCBI-ProteinID: UYQ70571
LinkDB
Position
complement(2165087..2166526)
AA seq 479 aa
MADQYDIIVIGAGPGGYVAAIRASQLGLKAAIVEREHMAGICSNWGCIPTKALLRSAEIY
GHMDHAKDYGLTADKFGFDIEAIVKRSRGIAGRMNDGVQFLMKKNKVDIIWGEATITKPG
EIKVEATKKKAVEPQHPKPKTTLGEGTYKAKNIIVATGARPRVLPGIEPDGDKIWTYFEA
LKPAKMPKSVAVMGSGAIGIEFASFYRSLGADVTVIELLPQIMPVEDAEIAGLARKRFEK
RGISILTDAKVSKVDKSKDGITAHVELKNGDKKEIKADVLISAVGVQANSENLGLEKAGV
KIDRGVIVVDGHGRTNVDGIWAIGDVAGPPMLAHKAEHEAVLAVETIAGKKVHGLDKSKI
PGCTYCEPQVASVGLTEAKAKEAGREIRVGRFPFVGNGKAIALGEPDGLVKTIFDKKTGE
LLGAHMVGAEVTELIQGFVVAMNLETTEEELIHTIFPHPTLSETMKESVLDAYGQALNI
NT seq 1440 nt   +upstreamnt  +downstreamnt
atggcagatcaatacgatatcatcgtgatcggtgccggccccggcggctatgtcgcagcc
atccgcgcgtcccagctgggcctgaaggccgcaatcgtggagcgtgagcacatggcgggc
atctgctcgaactggggctgtatcccgaccaaggcgctgctgcgctcggccgaaatctac
gggcacatggaccacgcgaaggattacggactgactgccgataagttcgggttcgatatc
gaggccatcgtcaagcgctcacgcggcattgccggccgcatgaatgacggcgtccagttc
ctgatgaaaaagaacaaggtcgatatcatctggggtgaggctaccatcaccaagcccggt
gaaatcaaggtcgaggcgaccaaaaagaaggcagtcgaacctcagcatccaaagccgaag
acaacactgggcgaggggacctacaaggccaagaacattatcgtcgccaccggtgcccgc
ccacgcgtcctgcccggcatcgaaccggacggcgataagatctggacctatttcgaggcc
ctcaaacctgccaaaatgcccaaatcggtggccgtgatgggctcgggcgccatcgggatc
gagtttgcatccttctatcgttcgctcggcgccgacgtgaccgtcatcgaacttctgccg
cagatcatgccggtcgaagacgctgaaattgccggcctggcccgcaaacgctttgaaaag
cgcggtatctcgatcctgaccgatgccaaggtttccaaggtcgacaagagcaaggacggc
atcaccgctcatgtggaactcaagaacggcgacaagaaagaaatcaaggctgacgttttg
atttccgcggttggcgttcaggccaattcggaaaatctggggctggaaaaggccggtgtc
aagatcgaccgcggcgtcattgtcgttgatggccatgggcgcaccaatgtcgatggcatc
tgggccatcggcgacgtcgccggcccacccatgctggcccacaaggccgagcacgaggcg
gtgctcgccgttgaaaccatagccggcaagaaggtgcatggcctggacaagtccaaaatc
cccggctgcacctattgcgaaccgcaggtggccagcgtcgggctgaccgaagccaaggcc
aaggaagccgggcgggagatccgcgtcggccgcttccccttcgtgggcaatggcaaggcc
atcgcactcggtgaaccggacggtctggtcaagaccatcttcgacaaaaagaccggtgaa
ctgctcggcgcgcacatggtcggcgccgaagtgaccgagctgatccagggctttgtggtg
gcaatgaacctcgaaaccaccgaggaagagctgatacacaccatcttcccgcacccgacc
ctgtcggaaacgatgaaggaaagcgtgcttgacgcatacggtcaggcactcaacatatga

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