Pelagibacterium flavum: OF122_11035
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Entry
OF122_11035 CDS
T08676
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
pem
Pelagibacterium flavum
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pem03029
]
OF122_11035 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pem02000
]
OF122_11035 (bamA)
Mitochondrial biogenesis [BR:
pem03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
OF122_11035 (bamA)
Transporters [BR:
pem02000
]
Other transporters
Pores ion channels [TC:
1
]
OF122_11035 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_2
Motif
Other DBs
NCBI-ProteinID:
UYQ70614
LinkDB
All DBs
Position
complement(2213928..2216048)
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AA seq
706 aa
AA seq
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MMKSAKLLHSVLLAMALFTFAPFIGSAALVLSVSPAHAQVAEGTEVSAIGFDGNSRFNDN
QLSAMVDVAARRVYTQAGIANDIQTIQAAYTQAGYSNVTVTSSTEPTDDGRVRVFFQVNE
GDRAGIAAINFTGNNSISSMVLKGVVTTKETHIFSWLFRDDLYSEDRLAVDRERIRLYYA
NRGFPDARVLSSVAEFDADRNAYFINFTVEEGQRYDFGNIAIETSIPGLDADALRGGIST
GSGSRYSLSDLSESTSELAVRATNQGYPFAEVRPRIDRDINNNIFNVTYLVDEGPRVYVE
RINITGNTKTRDFVIRREFDFAEGDPFNRALVTKGRANIEALGFFSSVQVTSAPGSAPDR
VILNVSVVERSTGDYGVGAGYSTRDGIFGEISLTERNFLGRGQYLRIALGRSENGETYDF
SFTEPRFMGLRISAGVDAYRRVTVEGSTFSYGTETTGGQLRFGLPVAQDLTLTTRLGLEQ
VTFTDDDAPFAPGYIGGTRDRLTLGYTLTYDTLDNQQRPTEGMILSFSQDYTTLTADFLK
TEVRARVYYPLWEEMGVVGSLRGQAGTITDLGGSGIHPTDTFQLGPNLVRGYRFGGMGAR
AAGTGDALGVLSYAGLSAEIDFPLPFLPENWGLRGAVWGDVGWIDGIPAGGYETAAGIGN
PLKSSVGGSLIWESPLGPLRGDFAHVIEPDTFDRTQVFQLTLSTLF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatcagccaagcttttgcacagcgtcctcctcgccatggcgcttttcaccttt
gcgcctttcatcggaagtgctgcgctggttctgagtgtttcgcctgcacacgcccaggtc
gctgaaggaaccgaagtctccgcgatcgggtttgacggcaacagccgtttcaatgacaat
cagctttcggctatggtcgatgtggctgcgcgccgggtgtacacacaggccggcattgcc
aacgacatccagaccatccaggccgcctatacccaggctggctattccaacgtcactgtg
acctcgagcaccgagccgaccgatgatggtcgggttcgtgttttcttccaggtcaacgaa
ggtgatcgcgcaggcattgcagcgatcaatttcaccggcaacaattccatcagctcgatg
gtgctcaagggcgtcgttaccaccaaggaaacccacattttcagctggctgttccgtgac
gatctctacagcgaggatcgccttgccgtcgatcgcgagcgtatccggctctattacgcc
aatcgtggtttccccgatgcgcgcgtgctgtcctcggtcgccgagtttgacgctgaccgc
aacgcctacttcatcaacttcactgttgaagaaggccagcgctacgacttcggcaacatc
gccatcgaaacctcgattccgggcctcgatgcagacgccctgcgcggcggcatcagcacc
ggctcgggtagccgttattcgctgtctgacctcagtgagtccacgtccgagcttgcggtg
cgtgcgaccaatcagggttatccctttgccgaggttcgcccgcgcatcgatcgcgatatc
aacaacaacatcttcaacgtcacctatctggtcgatgaaggaccgcgtgtttacgtcgag
cgcatcaatatcaccggcaacaccaagacccgtgactttgtcattcgtcgtgaattcgat
ttcgccgaaggcgatccgttcaaccgcgcgctggtgaccaagggtcgtgccaatatcgag
gctctgggcttcttctcctcggtgcaggtcacttccgcccccggcagcgctccggaccgc
gtcattctcaacgtttcggttgttgaacgcagcacgggtgattatggtgtcggtgcgggc
tattccacacgcgatggtattttcggcgagatttcgctcaccgagcgcaacttcctcgga
cgtggtcagtatcttcgcattgccctgggtcgttcggaaaatggcgaaacctatgacttc
agcttcaccgagccgcggttcatgggtctgcgtatctccgctggtgtagatgcctatcgg
cgcgtgacggttgaaggttcgaccttctcctatggcaccgaaaccactggcggtcagctc
cgcttcggtctgccggtcgcccaggacctgacgctcaccacgcgtctcggtcttgagcag
gtgacattcaccgatgatgacgctccttttgccccaggctacattggcggaacgcgcgat
cgtctgacgcttggttacacgctgacttacgacacgctcgacaatcagcagcgtcctacc
gagggcatgattctctccttctcgcaggattacacgacgctcaccgccgacttcctcaag
accgaagtcagggcgcgcgtttactacccgctctgggaagaaatgggcgtcgttggcagc
ttgcgtggccaggccggcacgatcactgatcttggtggcagcggtatccaccccaccgac
accttccagctgggccccaaccttgtccgtggctatcgcttcggtggcatgggtgctcgt
gcagccggaaccggtgatgcgctgggtgttctctcctatgccgggctgtccgctgagatc
gacttcccgctgccgttcctgcccgaaaactggggcctgcgtggcgcggtctggggtgat
gttggctggatcgatggcattccggctggcggatacgaaacagctgccggcatcggcaac
ccgctcaagtcctcggtcggcggctcgctgatctgggaatcgccgctggggccgctgcgg
ggtgactttgcccatgtgatcgagcccgacactttcgatcgcactcaggtgttccagctg
acgctttcgactctgttctaa
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