Pelagibacterium flavum: OF122_11100 Help Entry OF122_11100       CDS       T08676                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism pem  Pelagibacterium flavum Pathway pem03018   RNA degradation Brite KEGG Orthology (KO) [BR:pem00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     OF122_11100  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pem03019]     OF122_11100 Messenger RNA biogenesis [BR:pem03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      OF122_11100 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C Lactamase_B_2 RMMBL Lactamase_B Motif Other DBs NCBI-ProteinID:  UYQ70626 UniProt:  A0ABY6IJ60 LinkDB All DBs Position complement(2230488..2232200) Genome browser AA seq 570 aa AA seqDB search MTAIRSRNEPMAKKQSGQDEMVFLPLGGVGEIGMNMGLYGFGPADDRKWLVVDCGVSFGG PELPGIELVMPDPSFLEEESDNVVGLVLTHAHEDHYGAILDIWPAFDKPVFAGRFGAAML KAKRISNNIEDDVEVQIFTPGVPFQVGPFKVEPIEVSHSIPESNALLIETPAGRVIHTGD WKIDPSPIGTPPTNIKRLKEIGSDGKPLALICDSTNAMKEGDSPSETEVGVNLERLIATA KNRVAVTIFASNLGRMISIARAAAKADRQVVAAGRAVHRIAGIARELGLMEGVPEFLDQD AYGYLPRDKVVLIATGSQGESRAAMARIADGSHPVIDLSPGDMAIFSSWAIPGNEKAVQD IQSKLVDKGVQTVTGRDEMIHVSGHPRRHELAQLYDWLKPDILIPVHGEPMHLEAHAAFG REKGIKTVLSIRNGDMVQLFPNTKHHRGEVRTGILYLDGNLLCTPEESNVRDRRRLAFGG VAIVSLVVNGRGQIVSGPEFDLDGLPDLADDDDPLSAVAQSAARGAIKSFPEKRRADTGR FAEAIRRAVRSELNAAWGRKPIVKVFVHKV NT seq 1713 nt NT seq  +upstreamnt  +downstreamnt gtgaccgcaatccggtcgcgcaatgaacctatggcgaaaaagcagtccggtcaggacgaa atggtcttcctgccgctcgggggcgtcggcgagatcggcatgaatatggggctttacggc tttggccccgccgacgatcgcaaatggctcgtggtcgactgtggcgtcagcttcggcggc cccgagcttcctggcatcgaattggtgatgcccgacccctcttttctcgaggaagagagc gacaacgttgtcgggctggtcctcacccacgctcacgaagatcactacggcgctatcctc gatatctggccggctttcgacaagcccgtcttcgccggtcgtttcggcgccgccatgctc aaggctaagcggatatcgaacaacatcgaggacgatgtcgaagtccagatctttacaccc ggcgttccctttcaggtcggccccttcaaggtcgagcccatcgaggtttcccactcgatc cccgaatccaacgcgctattgatcgaaacgcccgccggccgcgtcatccataccggggac tggaagatcgatccgtcccccatcggcacgccgccaaccaacatcaaacgcctcaaggaa atcggctcggacggaaagccgctcgccctgatctgcgattccaccaatgcgatgaaagag ggtgacagcccctcggaaaccgaggtgggcgtcaatctcgagcgcctgatcgcaacggcc aaaaaccgcgtcgccgtcaccatctttgcctccaatctcggccgcatgatttccatcgcc cgcgccgccgcgaaggccgaccgccaggtcgtcgcagcgggcagggcggtgcatcgcatc gccgggattgcccgcgaactgggcttgatggaaggcgtgcctgaatttctcgatcaggac gcctacggctacctgccgcgcgacaaggtcgttctcatcgccacgggcagccagggcgaa tcccgtgcagcgatggcgcgcattgccgatggttcccatccggtaatcgatctatcgccg ggcgatatggcgatcttttcctcctgggccattcccggcaatgaaaaggccgtgcaggac atccagagcaagctcgtcgacaagggtgtccagaccgtcaccggtcgcgacgaaatgatc cacgtgtccggccatccgcgacggcacgaactggcccagctctacgattggctcaagccc gatatcctcatcccggtccacggcgagcccatgcacctggaggcccacgccgctttcggg cgcgaaaagggcatcaagaccgttctgtcgatccgcaatggcgacatggtccagctcttc cccaacaccaagcatcaccgtggcgaagtgcgtaccggcattctctatcttgatggaaac ctcctgtgcacgcccgaggaatcgaacgtgcgcgaccgccggaggctggcattcggtggt gtcgccatcgttagtctggtggtcaacggaagggggcagatcgtctcaggtcccgaattt gatctggacggacttcccgatctggcagacgatgatgatccgctcagcgctgtcgcccag tcggcggcacggggagcaatcaagagctttcccgaaaagcgtcgggccgatacagggcgc tttgccgaagcaatccgccgcgccgtgcggtccgagctcaacgccgcatggggccgcaag cccatcgtcaaggtgttcgttcataaggtgtag

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