Pelagibacterium flavum: OF122_11375
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Entry
OF122_11375 CDS
T08676
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pem
Pelagibacterium flavum
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pem03400
]
OF122_11375
Enzymes [BR:
pem01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
OF122_11375
DNA repair and recombination proteins [BR:
pem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
OF122_11375
Prokaryotic type
OF122_11375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UYQ70675
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All DBs
Position
2279385..2280785
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AA seq
466 aa
AA seq
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MASSTLVWLRNDLRIADNPALAAALKNEEPIHAVYVLETDRALRPLGGAAKVWLHESLKA
LNDALAERGVRLSYREGQSKTVIPEMIREMKAERVYWNRRYDPAGRAHDASLKKGLKADG
IAVESFNAALLVEPWDIATKQGTPYGVFTPFWKALRDKLIADPIGRAERHSEIKPPALDF
GKPPFWANGILERWAVGEEAAKRVLSGFLDDLLADYPNDRDLPRKRATSEMSPHLRFGEI
GPRQIWFAVRHLIASNPSMANAGDKFLSELAWREFSYHLLYHRGDIARHSMQERFDEIEW
RSDAKALHAWQKGQTGIPIVDAGMRQLWRTGWMHNRVRMLTASLLTKNLLTDWRKGEQWF
WDTLVDADPANNPASWQWVAGSGADAAPYFRIFNPITQGEKFDSRGDYVREWVPELRNLP
DKWVHKPWMADVETLDKAELKLGITYPIPIVDLSTSRERALETLKR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggccagttccacattggtttggctcagaaacgacttgcgcatcgcagacaatcccgcc
ctggctgcggcgctcaagaacgaggaaccgatccacgctgtctatgtgcttgagacagat
cgtgcgttacgtccgctgggcggggcggcaaaggtttggctgcatgaaagcctcaaggcc
ctcaatgacgcgctggccgaacgcggcgtgcggctttcctatcgcgaaggccagagcaag
acggttattcccgaaatgatccgggagatgaaggctgagcgggtgtattggaaccggcgg
tacgacccggcgggtcgcgcccatgatgcgtcactcaagaagggcctgaaggcggatggt
atcgcggtagagagtttcaatgccgcgctgcttgtcgagccctgggatatcgccacgaaa
cagggcacgccctatggcgttttcaccccgttctggaaggcgctaagggacaagctcatc
gccgatccgatcgggcgggccgaaaggcattcagagatcaaaccccctgccctcgatttc
ggaaagccgccattttgggcaaacgggatattggagcgttgggcggttggggaagaagcg
gcaaagcgtgttttgtccggttttctagatgatctgctggctgactaccccaatgatcgc
gacctgccgcgcaagcgcgcgacatcagaaatgtcgccgcatttgcggttcggggaaatc
ggaccacgccagatctggtttgcggtacggcatctgatcgcttcgaacccgtcgatggcg
aacgccggcgacaagttcctgtccgagttggcgtggcgggagttttcctatcacctgctc
tatcaccggggggatattgcccgccattcaatgcaggagcgtttcgatgaaatcgaatgg
cgatctgacgcaaaggcgctgcatgcctggcagaaggggcaaacgggcattccgatcgtc
gacgcggggatgcggcagctttggcggacaggctggatgcacaacagggtgcgcatgctc
acggcatcgcttctgaccaagaacctgctgaccgactggcgcaagggcgagcaatggttc
tgggacacgctggtggatgcagaccccgccaacaatccggcgagctggcaatgggtggct
gggagcggcgcggatgcggcgccctatttccggatattcaacccgataacgcagggggaa
aagttcgattcccgcggagactacgtgcgagagtgggtgccagaactcaggaacttgcct
gacaaatgggtgcacaagccgtggatggccgatgtcgaaacactggataaggcagagctt
aaattgggaataacttatccaataccgatcgtggatttgtcgaccagtcgggagcgggcg
ctcgaaacgctcaagcgataa
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