Pelagibacterium flavum: OF122_12070
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Entry
OF122_12070 CDS
T08676
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
pem
Pelagibacterium flavum
Pathway
pem00240
Pyrimidine metabolism
pem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
OF122_12070
Enzymes [BR:
pem01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
OF122_12070
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
UYQ70801
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All DBs
Position
complement(2411319..2412236)
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AA seq
305 aa
AA seq
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MSDYLEISPEIKYALADGQPVVALESTIITHGMPYPQNLETALAVEQVVRDNGAVPATIA
VMGGKCHVGVAGETLEDLARTGLEAAKASRRDLAAILVKGLTAGTTVATTMQIAAMAGIR
VFATGGIGGVHRGAESTFDISADLTELSQTPVAVVCAGAKSILDIPKTLEVLESNGVPVI
GYGTDAFPAFFARESGYGVDYRLDTPQEVAALIATQAALNMTGGVLVANPIPEADALDAD
EINGRIAAAIADAERQGVTRKDLTPYLLNRIFELTDGKSLVANIALVKNNAAVAARIAAA
LVKNH
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattacctcgagatctcccccgagatcaaatacgccctggctgacggccagcca
gtcgtggccctcgaatctacgatcatcacccacggcatgccctatccgcagaacctcgag
accgcgctggcggtggagcaggtcgtgcgcgacaatggcgcggtgcccgccaccatcgcg
gtcatgggcggcaaatgccatgtgggcgtggccggcgaaacgctcgaggacctggccagg
accgggcttgaagccgccaaggcctcccggcgcgacctcgcagccatcctcgtcaagggc
ctcaccgccggaaccaccgtcgccaccaccatgcagatcgctgccatggccggcatcagg
gtctttgccaccggcggcatcggcggcgtgcatcgcggggccgaatccaccttcgatatt
tccgccgatctcaccgagctgtcccaaacccctgtcgccgtggtttgcgccggcgccaag
tcgattctcgacattccgaaaaccctcgaagtgcttgaatccaatggtgttcccgtcatc
ggttatggcaccgacgccttcccggccttcttcgcgcgcgaaagcggatatggggtcgat
taccgcctcgacacgccccaggaggtcgcggccctcatcgccacacaggccgcgctgaac
atgaccggcggcgttctggtcgccaacccgatccccgaggccgacgccctcgacgccgac
gaaatcaacggccgcatcgccgccgccatcgccgatgccgagcggcaaggcgtgacccgc
aaggatctcaccccctatctgctcaaccgcatctttgagctgaccgacggcaagtcgctg
gtcgcaaacatcgcactggtcaagaacaacgccgccgtggcagcccggatcgcggccgcc
ctcgtcaagaaccactga
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