Pelagibacterium flavum: OF122_13440
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Entry
OF122_13440 CDS
T08676
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
pem
Pelagibacterium flavum
Pathway
pem00470
D-Amino acid metabolism
pem01100
Metabolic pathways
pem01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OF122_13440 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
OF122_13440 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pem01011
]
OF122_13440 (alr)
Enzymes [BR:
pem01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
OF122_13440 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
pem01011
]
Precursor biosynthesis
Racemase
OF122_13440 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
UYQ71059
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All DBs
Position
2650846..2651979
Genome browser
AA seq
377 aa
AA seq
DB search
MTSSKSILGGGITIDLDAIVRNWKALDTVSGKSLTGAVLKADGYGTGAKAVGRALYKAGA
RFFFVATPDEGVALREAIPDAFIFVLDGLIPRTAADYAAHGLMPVLASMSQLTEWLDFCL
NRGKAAPAALHFDTGFNRVGFRMKEAELVRRELDQSGFEPQMIMSHFACADQPSHEMTRK
QNGLFQGLLNHFPDIPASIANSAAVMSSKDYHYHLVRPGIAIYGGRAINGRPNPMAPVIS
MDVPILQIKDARIGETVGYGAAYRLRRDTRIAIMALGYADGYFRGLSGIGGQMGGRVAVN
GTIVPVLGRVSMDMTAIDITDVPGLIQPGDPVEILGPNISIDDVADAARTIGYEVLTTLN
GRFPRTYANVPDGVSLD
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaccagttcaaagagcattctcggtggcggcatcaccatcgacctggacgctatcgtg
cgcaactggaaggcgctcgatacggtatcgggcaaatcgctgactggggccgtgctcaag
gccgacggctatggcacgggcgcgaaagcggtcggtcgagccctttacaaagccggagcg
cgattctttttcgttgcgacgcccgatgaaggcgtggcgctgcgtgaggcaatccccgac
gcgttcattttcgtcctcgatgggctgattccgcgcaccgcggcagactatgcggcgcat
ggactgatgccggtgctagcctcgatgagtcagttgaccgagtggctcgatttctgcctc
aaccggggcaaggcggcgccggcggcgctgcatttcgacaccgggttcaaccgcgtcggc
ttccggatgaaggaggccgaactggtgcggcgcgagcttgaccagtcgggtttcgagccg
cagatgatcatgagccactttgcctgcgccgatcagccaagccacgaaatgacgcgcaag
cagaacgggctgttccagggtttgctcaaccatttccccgacatcccagcctcgatcgcc
aattcggcggcggtgatgagttcgaaggactatcactatcatctcgtgcggcctggcatt
gcgatatatggcgggagggccatcaacgggcggcctaatccgatggcgccggtgatttcg
atggacgtcccgatcctgcagatcaaggatgcgcggatcggggaaaccgtgggctatggc
gcggcctatcgcctgcgtcgtgacacgcgcatcgccatcatggcgctgggctacgcggac
gggtatttccgcgggctttcgggcattggcgggcagatgggcggacgggttgccgtcaac
ggcacaatcgtcccggtgctggggcgggtctcgatggacatgacagccatcgacatcacc
gatgtgccggggcttatccagccgggagatcctgtggaaattctcgggcccaacatctcg
atcgacgacgtggccgatgcggcgcggaccatcgggtacgaagtgctgacgacgctcaac
ggtcgtttcccgcgcacttacgcaaacgtgccggacggcgtgtcgctcgattga
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