Pelagibacterium flavum: OF122_13465
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Entry
OF122_13465 CDS
T08676
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
pem
Pelagibacterium flavum
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pem03009
]
OF122_13465 (der)
Ribosome biogenesis [BR:
pem03009
]
Prokaryotic type
GTPases
OF122_13465 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
AIG1
Ras
RsgA_GTPase
Roc
Arf
ABC_tran
SRPRB
AAA_24
Septin
AAA_29
DUF5906
TniB
MMR_HSR1_Xtn
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
UYQ71063
LinkDB
All DBs
Position
complement(2656611..2658071)
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AA seq
486 aa
AA seq
DB search
MSANVTVAIVGRPNVGKSTLFNRLVGRKIAIVDDTPGVTRDRREGLGRIGDLTFTLVDTA
GYEDANDDSLEARMRRQTEMAIAEADVILFMIDARAGLTPTDEHFSRLLRKADKEIHVIG
NKAEGRAAEAGLVEAYALGFGEAIPLSAEHGLGLADLYSIISQAVDKADEAKAAAAEAEF
DYDMVQKPAVDVDVNEDEGEDLAGDTAPMRWNPNRYLNVAIVGRPNAGKSTLINRMVGEE
RLLTGPEAGITRDSIMVPWEWEGRVINLVDTAGIRRKSRVQKKLEKLSVSDSLRSIQYAE
VVVLLLDATIPFEKQDLALADLVEREGRAMVIAVNKWDLIEDKNAKILELRAECERLLPQ
LRGIPLVTMSGLQGRNIDKLMKAIFEIERTWNVKIRTAKLNRWLAAMTEHHPPPAVSGRR
LKLRYMTQAKTRPPSFIVFASRPDALPKAYQRYIVNGLREDFNLPGTPIRLWVRGGKNPY
VDDDGK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgaatgtaaccgtcgccatcgtcggccgccccaatgtgggcaaatccaccctg
ttcaatcggctggtgggccggaaaatcgcgatcgtcgacgacacgccgggtgtgacccgc
gaccgccgcgaaggtctgggccgtattggcgatctgaccttcacgctggtcgacaccgcc
ggctatgaagacgccaatgacgacagcctcgaagcgcgcatgcgccgccagaccgaaatg
gccattgccgaggccgacgtcatcttgttcatgatcgacgcccgcgccggcctgaccccc
acagacgagcacttctcccgcctgctgcgcaaggccgacaaggaaatccacgtcatcggc
aacaaggccgagggccgcgcggcagaggccggactggtcgaggcctacgcgctgggtttc
ggcgaagccataccgctttccgccgagcacgggctgggcctggccgatctctattccatc
atatcccaggccgtcgacaaggccgacgaagccaaggccgctgccgccgaggccgaattc
gactacgacatggtgcaaaagcccgccgtcgatgtggatgtcaacgaagacgagggcgag
gatttggcgggcgacacagcgcccatgcgctggaatcccaaccgctatctcaacgtcgct
atcgtggggcgcccaaacgccggcaagtcgaccctcatcaatcggatggtgggtgaagag
cgccttctgaccggccccgaagcgggtattacccgcgattcgatcatggtcccgtgggaa
tgggagggccgggtcattaacctggtcgataccgcaggcatccgccgcaaatcccgcgta
cagaaaaagctcgaaaaactgtcggtttccgacagcttgcgttcgatccaatacgccgaa
gtcgtcgtcctgctgctcgatgccaccatcccgtttgaaaagcaggatctggctctggcc
gatcttgtcgagcgcgaaggtcgcgccatggtcattgctgtcaacaaatgggatctgatc
gaagacaagaacgccaagatcctcgaactgcgcgccgaatgcgaacgcctgctgccccag
ctgcggggcattccgctggtcaccatgtcgggcctgcagggccgcaatatcgacaagctg
atgaaggcgattttcgagatcgagcggacctggaacgtcaagatccgcaccgccaagctc
aatcgctggctcgccgccatgaccgaacaccatccgcccccggcagtgtcaggccggcgg
ctgaaactgcgctacatgacccaggccaagacgcgcccgcccagctttatcgtctttgct
tcacgccccgacgccctgcccaaggcgtatcaacgctacatcgtcaacggtctgcgtgag
gacttcaacttgcccggaacgcccatccgcctctgggtccgcggcggcaagaacccctac
gtcgatgacgacgggaaatag
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