Pelagibacterium flavum: OF122_14425
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Entry
OF122_14425 CDS
T08676
Name
(GenBank) efflux RND transporter permease subunit
KO
K18989
multidrug efflux pump
Organism
pem
Pelagibacterium flavum
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pem02000
]
OF122_14425
Transporters [BR:
pem02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OF122_14425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
UYQ71235
LinkDB
All DBs
Position
2856468..2859779
Genome browser
AA seq
1103 aa
AA seq
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MTSFIERILRMPRVVMTIMALLLLAGGLSYSVLPKESFPAIDVPYLYVSISQTGVSPRDA
ENLLARPAEEELNGLDGLVNMSSTSTTGHASVFLEFGANVDTEQALIDTRARIDAIKANL
PADADDPTVNEIDMVGYPIISVAVYGDVPERELVRRAEELQTALEGIASVREVTLSGARD
EVVEVTIDLMRLEAYDLTANQLFDALARNNLVVAGGTLNTGQGSFSVEVPGLITSAQDVF
ELPIKTDGTNVVTFGDIANVTRTLEDATEYTNVNGSPALILGVSKKAGTNIIEVSDTVRA
VTEELAAEWPQGVGHSFFLDQAETTLSLFRSLEAAVLTAVALVLITCIAVLGVRAAFMIG
MSIPLSFMIAFLYMQMTGMTINMMVMFGLVIAVGVLVDDPVVVVEYAERKLQEGVSKKEA
FIQAMHKMFIPVIGATATTLAAFVPLLFWPGIIGKFMTDLPTIVIVVMSASFVSALIFMP
VIGAVIASTHVDPERKEQADIVMYPEKFHPKKVKGPTGIYVRLMSVLLRWPIPTLLVGFG
IVFGVFFAYAANPTGTEAFPASEPEYATVAVVARGNYSPQEVRDMLVEVEDELMQVHGIR
DIIMQFGTTGAMGTMPPDTIGNFQLQLVDYNHRVKAEEIFSDIRQRVADISGLQVQVLAT
ESGPPAGKDINMRVESSSYDNLAPTVERIRDYLENELANTADIEDGRPSPGIDWQVTVDR
LEAARYGIGVRELAPYVQLVTSGVNLGTYRDQSTGDELDIKVRLPQDERTLDALDSMRIA
TSQGMIPVSNFIDRQAVPKVANIERRNQTYVMPIAANLVNLPEGVYAADRVAELQAWLDD
QEWPDGVTFAFGGAEEQMGDANAFIAQAFGAAVFLIFLILLLEYNSFYQVFVTLSTVFMS
VAGVLLGMLATGMSFSAIMTGLGVVALAGIVVKNGIVLIDTYNEYNRHQQVEPVTAMLLT
TAQRVRPVLLTAFLTALGVIPMWANVEFDFLRREIVVGGIAGSWFIHLSAALVSGLFFST
ALTLIMVPVMVTAPKVIKGQVGSLFNWVRGRKAAEATPSGFDGMAVEVAGDDAARQHVVT
KDTELIERNENGVTVLSRRPAAE
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcttcatcgagcgcatcctgcgcatgccccgcgtcgtgatgacaatcatggcg
ttgctgttgctcgcgggcgggctttcctattcggttctcccaaaggaaagcttccccgcc
atcgacgttccgtatctttacgtttcgatcagccagacgggcgtttcgcctcgcgacgcc
gaaaacctgctggccaggccggccgaagaagaactcaacgggctggacggtctggtcaac
atgtcgtccacctcgaccaccgggcatgcttcggtgttcctcgaatttggtgcgaacgtt
gataccgaacaggctctgatcgatacccgggcgcgcattgatgccatcaaggcaaacctg
cccgccgacgctgacgatccgacggtcaacgaaatcgacatggtgggttaccccattatc
tcggtggccgtttacggtgatgtgccagaacgcgaactggtgcgccgcgcggaggaactt
cagaccgcgctcgaaggcatcgcgtcagttcgcgaagtcacgctgtcgggtgcacgcgac
gaagttgttgaagtcaccatcgacctgatgcgcctcgaggcttacgacctcacggcgaac
cagctgttcgacgctctggcccgcaacaatctcgtggtcgccggcggcacgctcaacacc
ggtcagggctctttcagcgtggaggttcccggactcatcaccagcgcccaggacgtcttc
gagctgcccatcaagacagatggcaccaacgtcgtcacgtttggcgatatcgccaacgtc
acgcgcacgctggaggacgccacagaatacaccaacgtaaacggctcccctgccctgatt
ctcggtgtgagcaaaaaagccggcaccaacatcatcgaggtatccgacaccgttcgtgca
gtcaccgaggaacttgcagccgagtggccgcaaggcgtgggccacagcttctttctcgat
caggctgaaaccacgctcagcttgttccgttcgctcgaggctgcggttctgaccgctgtg
gcgctggtgcttattacctgcattgccgtgcttggcgtccgcgccgcgttcatgatcggc
atgtcgatcccgctgtctttcatgatcgcatttctctacatgcagatgaccggcatgacg
atcaacatgatggtcatgttcgggctggtgatcgccgtgggcgttctggtcgacgacccc
gtggtggtcgtcgaatatgccgagcgaaaactgcaggaaggtgtctccaagaaagaggcc
ttcatccaggcgatgcacaagatgttcataccggtcatcggtgcgacagccacaaccctt
gccgcattcgtgcccctgctgttctggcccggtatcatcggcaagttcatgaccgacctt
ccgacgatcgtgatcgtcgtgatgtccgcatcatttgtttcggcgctcatcttcatgccg
gttatcggtgccgtcattgcctcgacccatgtcgatcccgagcgcaaggaacaagccgat
atcgtcatgtatcccgagaagttccaccccaaaaaggtgaagggaccgaccgggatatac
gtgcggctcatgtccgtgcttttgcggtggccgatcccaacattgttggtcggcttcggc
atcgtgttcggagtatttttcgcttacgcagccaaccctacgggaaccgaggcattccca
gcctccgagcctgaatatgccacggttgcagtggttgcccgcggcaattattcgccgcaa
gaggtccgcgacatgcttgtcgaggtcgaagacgaattgatgcaggtccacggcattcgg
gacatcatcatgcagttcggaacgactggcgccatgggtaccatgccgcccgacacgatc
ggcaatttccagctccagctcgtcgattacaaccaccgggtgaaggccgaggaaatcttc
tccgatattcgccaacgcgttgccgatatctccggcctgcaggttcaggttctcgccacc
gagagcggtccaccggcgggcaaggacatcaacatgcgtgtagaaagctccagctacgac
aatctggcgccgaccgtcgaacgcatccgtgattatctggagaacgagctcgccaatacc
gccgacatcgaggatggccgcccctcacccggcatcgattggcaggtgaccgtcgatcgt
ttggaagcagcccgatacggtatcggcgtgcgcgaactggctccatatgttcagttggta
acgtcaggcgtcaatctgggcacctatcgtgatcagagcacaggggatgaactcgacatc
aaggttcgccttccccaggatgaacgcaccttggatgcgctcgattccatgcggattgcc
acatcgcagggcatgatcccggtttcgaacttcatcgatcggcaagcggttcccaaggtc
gcgaatatcgaacggcgcaatcagacctatgtgatgccgattgcagccaatctggttaat
cttccagaaggtgtttatgccgccgatcgcgtcgccgaactgcaggcatggctcgatgat
caggaatggcccgatggcgtgaccttcgcgttcggtggtgccgaagagcagatgggtgat
gccaatgcctttatcgcccaggcgttcggtgctgcggtgttcctgatcttcctgatcctg
ctgctcgagtacaacagcttctatcaggtgttcgtaacgctctcgacggtattcatgtcg
gttgccggtgttctgctcggcatgctcgctacgggtatgagtttttcggccatcatgaca
ggcttgggcgttgttgcgctggcggggatcgttgtcaaaaacggtatcgttctgatcgat
acctacaatgagtacaaccgccatcagcaggtcgagccggtaaccgcaatgctactcacg
acggcgcaacgtgtgcgtcccgtgctactcaccgcattcctgacggcgctcggcgttatc
cccatgtgggcaaatgtcgaattcgacttcctgcggcgcgaaatcgtggtcggcggcatc
gccggatcgtggttcatccacctttcggcggcgctggtaagcgggttgttcttttcgact
gcgctgaccctgatcatggtgccggtcatggttacggcccccaaggtcatcaagggtcag
gttggcagcctgtttaactgggtccgtggccggaaggcggcggaagcaacgccctctggc
tttgatggcatggccgttgaagtggcaggcgacgatgcggcgcgccagcatgtcgtgacc
aaggataccgaactgatcgaacgcaatgagaatggcgttacggttctttcccgaagaccc
gcagccgaataa
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