Pelagibacterium flavum: OF122_15150
Help
Entry
OF122_15150 CDS
T08676
Name
(GenBank) lytic murein transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
pem
Pelagibacterium flavum
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pem01011
]
OF122_15150
Enzymes [BR:
pem01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
OF122_15150
Peptidoglycan biosynthesis and degradation proteins [BR:
pem01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
OF122_15150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLT_2
PG_binding_1
PG_binding_3
PG_binding_2
Motif
Other DBs
NCBI-ProteinID:
UYQ71373
UniProt:
A0ABY6ILA4
LinkDB
All DBs
Position
complement(3016220..3017443)
Genome browser
AA seq
407 aa
AA seq
DB search
MRNDAPTIEFPVLSRRRAMALGLAAGAALVLPRPAFANVQNFVASVWPEASARGVSRAIF
EQAFAGFAPSDRIMSLTRSQPETVKTTGQYVSDAVSSARVSNGQRMRGEWSQTLGGTQQR
YGIQPEIVLAIWGMETNYGSYMGGNNVIHALATLTYGNYRRDFFKNELLTALQILQAGHV
AAPQMVGSWAGAMGHTQFMPSSFVAYAVDYNGNGRRDIWNSIPDALASTANYLKSHGWRN
GETWGYEVQLPSNFDYGRAWDIGNQTLGQWEAMGVRRTGGRTFPRAGDMGRIFMPSGGSG
PVFLLLANFDVIKRYNNSNNYALAVGHLADRILGVGPFVRSFPANETGLTRSQREELQSL
LNRRGYNVGTPDGVVGPKTRQGIIAFQRAAGLLADGHASSSLLSALR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaacgacgcccctacgattgagtttccagttctttcgcgccgccgtgcgatggcg
ctcggcctggctgctggcgcagcgctcgttctcccgcgcccggctttcgccaacgttcag
aatttcgtcgcctcggtctggccggaagcgtccgcccgcggcgtttcccgcgccatattc
gagcaggcctttgccggttttgcgccttcggatcgcatcatgagcctcacgcgcagccag
cccgagacggtcaagacgaccggccagtacgtgtctgacgctgtgtcgtccgcgcgcgtt
tccaatggtcagcgcatgcgtggcgagtggagccagactcttggcgggacccagcagcgg
tacggtattcaacccgagatcgtcttggccatatggggcatggaaaccaattatggctcg
tacatgggtggcaacaacgtcattcacgcactggcaaccctgacctacggcaattaccgg
cgtgatttcttcaagaacgaactgttgactgcgctgcagatcctgcaggcggggcatgtc
gccgcgccgcaaatggtcgggtcctgggccggcgcaatggggcacacacagttcatgccc
tccagttttgtggcctatgcggtcgattacaacggcaatggcaggcgcgacatctggaac
tcgatacccgacgccttggcctcgaccgccaactatctcaaatcgcacggctggcgaaac
ggcgagacctggggctacgaagtccagctcccatccaatttcgactacggtcgcgcctgg
gatatcgggaaccagaccctcggtcagtgggaggccatgggcgtccgtcgcacaggtgga
cggaccttcccgcgcgctggcgatatgggacgcatcttcatgccgtcgggcggcagcggc
ccggttttcctgctgctggccaatttcgatgtgatcaagcgctacaacaattcaaacaat
tacgcgcttgctgtcggccacctggccgaccgtattctcggggtcggtccctttgtccgc
tcgttccctgccaacgagactggattgacccgttcacagcgcgaagaacttcaaagtctt
ctcaatcgcagaggttataatgtcggcactccagacggcgtcgtcggccccaaaactcgc
cagggaataatcgccttccagcgcgcggccggccttctggcagacggtcacgcttcgagc
agcctgctttctgcgctgcgctag
DBGET
integrated database retrieval system