Pelagibacterium flavum: OF122_15465
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Entry
OF122_15465 CDS
T08676
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
pem
Pelagibacterium flavum
Pathway
pem00740
Riboflavin metabolism
pem00790
Folate biosynthesis
pem01100
Metabolic pathways
pem01110
Biosynthesis of secondary metabolites
pem01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
OF122_15465 (ribB)
00790 Folate biosynthesis
OF122_15465 (ribB)
Enzymes [BR:
pem01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
OF122_15465 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
OF122_15465 (ribB)
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Gene cluster
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
UYQ74136
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All DBs
Position
complement(3068921..3070000)
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AA seq
359 aa
AA seq
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MSESDQRVQAALEAMKSGQMVVVIDDHDREGEGDIIAAASTITPEQMAFIVRHTSGIVCA
PITGERAQKLRLDPMVATNDSAHSTAFTVTIDFKHGTTTGISAEDRTATVRALTNGNVAA
EDFSRPGHIFPLIARRGGVLMRSGHTEAAVDLCKLADLPDVGVICELVNDDGTVTRGQQV
ADFAATHGLPLISVADLIAYRQRREKLVERVATFEMDTVAGRAIAYAYSTPFDRVQHLAL
VFGDVGQGASVNVRLQREDIVTDVFGGAETLNASIAALAETGGVLVYLREGNAGVAYDKA
AAEAEREDHGSARDRDAEWREVGLGAQILRDLGISAIKPMSSRSRHYVGLEAFGITISD
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atctctgaatccgatcagcgcgtccaggcggcgctcgaagccatgaagagcggccagatg
gtcgttgtgattgacgatcacgacagggaaggcgagggcgatatcattgctgccgcgtcc
accatcacgcccgagcagatggccttcatcgtgcgccacacctctggtatcgtctgtgcc
ccgataactggcgagcgtgcccagaaactgcgcctcgatccgatggtcgccaccaatgat
tccgcgcattcgacggcattcaccgtcaccatagatttcaagcacggcaccacgaccggc
atctccgccgaggaccgcaccgcaactgttcgcgcattgaccaacggcaatgtggccgcc
gaggatttctcgcgccccggccatatcttcccgctgatcgcccggcggggcggcgtcctc
atgcgctcgggccacaccgaggccgcagtcgatctgtgcaaactcgccgatctgcccgat
gtcggggtgatctgcgaactggtcaatgatgacggcacggtaacccgtggccagcaggtc
gccgattttgcggcaactcatggcctgccgctgatctcggtcgctgatctgatcgcctac
cgccagcgtcgcgaaaagctcgttgagcgggtcgcgaccttcgagatggataccgtcgcc
ggtcgcgccatcgcctatgcctactcaaccccgtttgatcgcgtgcagcatctcgcgctg
gtgttcggtgacgtggggcagggcgcgtcggtcaacgtccgcctccaacgtgaggatatc
gtgaccgacgtgttcggtggcgccgaaacgctcaacgcatcgattgccgctctggccgaa
accggtggcgttctggtctatctgcgcgaaggcaatgcaggtgtcgcctatgacaaggcc
gccgctgaagccgagcgcgaagaccatggttcggcgcgtgatcgggatgccgaatggcgt
gaagtcgggctcggcgcccagatcctgcgagatctcggcatctccgccatcaagccgatg
tcctcacgttcgcgccactatgtcggacttgaggccttcggaattacgatttccgattag
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