Pelagibacterium flavum: OF122_16095
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Entry
OF122_16095 CDS
T08676
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pem
Pelagibacterium flavum
Pathway
pem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OF122_16095 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pem03019
]
OF122_16095 (groL)
03110 Chaperones and folding catalysts [BR:
pem03110
]
OF122_16095 (groL)
03029 Mitochondrial biogenesis [BR:
pem03029
]
OF122_16095 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pem04147
]
OF122_16095 (groL)
Enzymes [BR:
pem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
OF122_16095 (groL)
Messenger RNA biogenesis [BR:
pem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
OF122_16095 (groL)
Chaperones and folding catalysts [BR:
pem03110
]
Heat shock proteins
HSP60 / Chaperonin
OF122_16095 (groL)
Mitochondrial biogenesis [BR:
pem03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
OF122_16095 (groL)
Exosome [BR:
pem04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OF122_16095 (groL)
Exosomal proteins of other body fluids (saliva and urine)
OF122_16095 (groL)
Exosomal proteins of breast cancer cells
OF122_16095 (groL)
Exosomal proteins of colorectal cancer cells
OF122_16095 (groL)
Exosomal proteins of bladder cancer cells
OF122_16095 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UYQ71554
UniProt:
A0ABY6ILS9
LinkDB
All DBs
Position
3194827..3196467
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEVKFSTEARDKMVRGVNILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELEDKFENMGAQMLRTVASKTNDIAGDGTTTSTVLAQSIVNEGVKAVAAGMNPMDLKRGI
DLAVTEVISNLASKAVKISNSSEVAQVGTISANGEKAIGDMIANAMQKVGNEGVITVEEA
KTAETELDVVEGMQFDRGYLSPYFVTNTEKMVAQLDDPLILLHEKKLSNLQALLPVLESV
VQSNRPLLIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQV
ISEDLGIKLENVTTDMLGTAKRVEITKENTTIVDGSGSKDDIEGRVNQIKAQIEETSSDY
DKEKLQERLAKLAGGVAVIKVGGSTEVEVKERKDRVDDALNATRAAVEEGIVAGGGVALL
RASNALTVKGVNADQQAGIAIVKRALQEPIRQIANNAGDEGSVVVGKILDNGSDTFGYDA
QTGEYGDMIQMGIIDPVKVVRTALEDAASVAGLLVTTEAMVAEIPKEAAPAMPGGGGMGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaagaagtcaaattctcgaccgaagcccgcgacaagatggtccgcggcgtc
aacatcctggccaatgcggtcaaggtgacgctcggtcccaagggccgcaacgtggtcatc
gaaaagtcgttcggcgcaccgcgcatcaccaaggacggcgtgaccgttgccaaagaaatc
gaactcgaagacaagttcgagaacatgggcgcgcagatgctgcgcaccgtggcctccaag
accaacgacatcgccggtgacggcaccacgacttcgaccgttctggctcagtcgatcgtc
aacgaaggcgtcaaggccgtcgctgccggcatgaaccctatggatctcaagcgcggcatc
gatctggctgtgaccgaagtgatctcgaacctggccagcaaggcggtcaagatttcgaac
tcttcggaagtcgctcaggtcggcacgatctctgccaatggcgaaaaggccatcggcgac
atgatcgccaacgcgatgcagaaggtcggcaacgagggtgtcatcaccgtcgaggaagcc
aagaccgcagaaaccgaactcgatgtcgttgaaggcatgcagttcgaccgcggttacctg
tcgccgtatttcgtgaccaatactgaaaagatggtcgcccagctcgatgatccgctcatc
ctgctgcacgaaaagaagctctcgaacctgcaggctctcctacccgtgctcgaaagcgtc
gttcagtccaaccgtccgctgctgatcattgcagaagacgttgaaggcgaagcgcttgcc
accctcgtcgtcaaccgtctgcgtggcggtttgaaggtcgctgccgtcaaggctccgggc
ttcggcgatcgccgcaaggccatgctcgaagacatcgccatcctgaccggtggccaggtg
atttccgaagacctcggcatcaagctcgagaacgtgaccaccgacatgctgggcactgcc
aaacgcgtcgagatcaccaaggaaaacaccaccatcgtcgatggttcgggctccaaggac
gacatcgaaggccgcgtcaaccagatcaaggctcagatcgaagaaacctcgtcggactac
gacaaggaaaagcttcaggaacgcctggccaaactggccggtggcgttgccgtgatcaag
gtcggcggttcgaccgaagtggaagtgaaagaacgcaaggaccgcgtcgatgacgcgctc
aatgcgacccgcgcggcggttgaagaaggcatcgttgccggtggtggcgttgcgctgctg
cgggcctcgaacgctctgaccgtcaagggtgtcaacgccgaccagcaggccggcatcgcc
atcgtcaagcgcgctctgcaggagccgatccgtcagatcgccaacaatgctggcgacgaa
ggttcggttgtcgtgggcaagatcctcgacaatggttcggacacgttcggctatgacgcg
cagacgggcgaatatggcgacatgatccagatgggcatcatcgatcccgtcaaggtcgtg
cgtaccgctctcgaagacgctgcatcggtcgctggcctcctggttaccaccgaagccatg
gtcgccgagatccccaaggaagctgccccggcaatgcccggcggtggcggtatgggcggc
atgggcggcatggatttctaa
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