Pelagibacterium flavum: OF122_16540
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Entry
OF122_16540 CDS
T08676
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
pem
Pelagibacterium flavum
Pathway
pem00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OF122_16540
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pem01007
]
OF122_16540
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pem03016
]
OF122_16540
Enzymes [BR:
pem01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
OF122_16540
Amino acid related enzymes [BR:
pem01007
]
Aminoacyl-tRNA synthetase
Class I (A)
OF122_16540
Transfer RNA biogenesis [BR:
pem03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
OF122_16540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
tRNA-synt_1
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1c
DUF903
Motif
Other DBs
NCBI-ProteinID:
UYQ71630
LinkDB
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Position
complement(3280274..3281920)
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AA seq
548 aa
AA seq
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MSQTLPPLDPSAIAAAPNARAWPFEEAKKVVRRAEKLGKDEVIFETGYGPSGKPHIGTFG
EVMRTTMVRTAFRLLTGDAIKTRLICFSDDMDGMRKIPDNVPSREALEPYLQMPLTAVPD
PWTNEFPSFGEHNNAMLRRFLDTFGFDYEFASATDYYKSGKFDAMLLRALERYDDIMGVM
LPTLGAERQATYSPILPISPISGRVLYVPMKEVNAKDGTVTFTDEDGRDVTVPVTGGNVK
LQWKPDFGMRWAALGVDFEMFGKDHQTNQVIYDRICSILGGTPPEHYVYELFLDDQGQKI
SKSKGNGITIDEWLTYASSESLSLFMFQKPRTAKRLYFDVIPKAVDEYFTFAAKAQGEDA
GQLLENPAFHIHSAMPPAYDMPVSFALLLNLATASNPESREVMWGYISAYAPGVTPQTHP
HLDALVGYAMRYFEDFVEKSYRAPDDVERKALEELSETLAKLPADAGGEAIQNAALDVAR
EIERYQDHKRLGPNGGPGVSGAFFQMLYQVLIGQERGPRFGSFAALYGIENTRKLIEKAL
SGKLTSRN
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
ttgtcccagaccctgccccctctcgatccctcagccattgccgctgcccccaacgcccgt
gcctggccgttcgaggaagccaaaaaggttgtgcggcgcgccgagaagctgggcaaggac
gaggtgatcttcgaaaccggctacggcccctcgggcaagccccatatcggcacgttcggc
gaggtgatgcgcaccactatggtccgcaccgcgttccggcttctgaccggcgatgcgatc
aagacacggctgatctgcttttccgacgacatggacgggatgcgcaagatccccgacaac
gtgccctccagggaggcgctggagccctatctccagatgccgctgaccgcagtgcccgat
ccctggaccaacgagtttcccagctttggcgaacacaacaacgccatgctgcggcgcttc
ctcgataccttcgggttcgattacgaattcgcaagcgccaccgattattacaagtcgggc
aagttcgacgccatgctgctgcgcgcgctcgaacgctatgacgacatcatgggcgtcatg
ctccccacgctgggcgccgaacgtcaggctacctattcccccatcctgcccatctcgccg
atctcggggcgcgtgctttacgtgcccatgaaggaggtcaacgccaaggacggcaccgtg
accttcaccgacgaggacgggcgcgatgtgaccgttccggtgaccggcggcaatgtaaag
ctgcaatggaagcccgatttcggcatgcgctgggcagcgctcggggtcgatttcgaaatg
ttcggcaaggatcatcagaccaaccaggtgatctatgacaggatctgttcgatcctcggc
ggcaccccgcccgaacattacgtctatgaactgttcctcgatgaccagggccagaagatt
tccaagtccaagggcaacggcatcaccatcgacgagtggttgacctacgcgtcctcggaa
agcctctcgctgttcatgttccaaaagcccaggacggccaagcggctctatttcgatgtc
atccccaaggcggtggacgaatatttcaccttcgccgccaaagcccagggcgaggatgcg
ggccagcttctcgaaaacccggccttccatatccactcggccatgccccctgcatacgac
atgccggtgagctttgccctgctgctcaatctcgccacagcgtccaaccccgagagccgg
gaagtgatgtggggttacatttcagcctacgcccccggcgtgacaccccagacccacccc
catctcgatgcgctggtcggttatgcgatgcgctatttcgaggacttcgttgaaaagtcc
tatcgcgcacccgacgacgtcgagcgcaaggcgctcgaagagctctccgagactcttgcg
aagctcccggccgatgcgggcggtgaggcgatccagaacgcggccctcgacgtggcgcgc
gagatcgaacgctatcaggaccacaagcgcctcggccccaatggcggcccgggcgtgtcg
ggcgcctttttccagatgctctatcaggtcctgatcggccaggaacgcggcccccgcttc
ggctcgttcgccgccctttacggcatcgagaacacccgcaagctgatcgaaaaggcactg
agcggaaaactgacctcccggaactga
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