Pelagibacterium flavum: OF122_16620
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Entry
OF122_16620 CDS
T08676
Symbol
rhaS
Name
(GenBank) rhamnose ABC transporter substrate-binding protein
KO
K10559
rhamnose transport system substrate-binding protein
Organism
pem
Pelagibacterium flavum
Pathway
pem02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OF122_16620 (rhaS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pem02000
]
OF122_16620 (rhaS)
Transporters [BR:
pem02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
OF122_16620 (rhaS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
UYQ71646
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Position
3297366..3298361
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AA seq
331 aa
AA seq
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MSLIKTLLTSTVIAASMMTVTAPAQAQTRIAVLVKSLGNGFFEAAARGAEEAAEEIGDVE
IIYTGPTEPTAEAQIEVINTLIAQQVDAIAISANDPDAVVPALQRAMERGITVVSWDSGV
AEAGREMHLNPSSNALIGDTIIRLAADHLPDGGQVAILSATATATNQNIWIEEAQAVLPN
YEGIELVDIVYGDDLSDKSYREAQGLMQSYPELDAIIAPTTVGIVAAAQAVTDAGKIGEI
NVTGLALPSEMAGHIESGASKSFAIWNPIDLGYSITHIAHALATDAATAEPGATIGIGRV
GEVTIGDNGEAAMSEPFTYDASNIDEYKDIF
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgatcaaaaccctactgacatccacggtcattgctgcatccatgatgacagtg
acggcgcccgcccaggcccagacccgcattgcggtgctggtcaaatcgctgggcaacggc
tttttcgaggccgcagcacgcggcgcagaagaagcggcagaggaaatcggcgatgtcgag
atcatctataccgggccgaccgagccgacggccgaggcccagatcgaagtcatcaacacg
ctgatcgcacagcaggtcgatgccatcgccatctcggccaacgaccccgacgccgtggtt
cccgcgctgcagcgcgcaatggaacgcggcatcacggtggtttcctgggattccggtgtt
gcggaagccgggcgtgaaatgcatctcaacccgtcctcgaatgcgctgatcggtgacacg
atcatccgtctggccgccgaccaccttcccgacggcggacaggttgccattctttcggcc
accgcaacggccaccaaccagaacatctggatcgaggaggcccaggcggttcttccgaac
tatgaggggatcgaactggtcgacatcgtttatggcgacgacctttcggacaaatcctac
cgcgaggcccagggcctgatgcagtcctatcccgaactcgacgccattattgcgccgacc
acggtgggcatcgttgcagccgcccaggcggtgaccgatgcgggcaagatcggcgagatc
aatgtgaccggcctggccctgccctcggaaatggcgggccatatcgagtccggcgcttcg
aaatcctttgcgatctggaatcccatcgatctgggctattcgatcacccatatcgcccat
gccctggcaacggacgcggcgaccgccgagcccggcgcgaccatcggcatcggccgggtg
ggcgaggtgacaatcggcgacaatggcgaagccgccatgtccgagccgttcacctacgac
gcctccaatatcgatgagtacaaggacatcttctag
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