Pelagibacterium flavum: OF122_17510
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Entry
OF122_17510 CDS
T08676
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pem
Pelagibacterium flavum
Pathway
pem00300
Lysine biosynthesis
pem01100
Metabolic pathways
pem01120
Microbial metabolism in diverse environments
pem01230
Biosynthesis of amino acids
Module
pem_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OF122_17510 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pem01002
]
OF122_17510 (dapE)
Enzymes [BR:
pem01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
OF122_17510 (dapE)
Peptidases and inhibitors [BR:
pem01002
]
Metallo peptidases
Family M20
OF122_17510 (dapE)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
S-AdoMet_synt_C
Motif
Other DBs
NCBI-ProteinID:
UYQ71816
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Position
3494516..3495685
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AA seq
389 aa
AA seq
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MSNRAVPLLADLIRRPSVTPIEEGVLDVLEAFLSPLGFVCTRLKFEGDGSYPVDNLYATR
KGKEPGPHLLFAGHTDVVPPGDVTAWTHDPFSGEIVDGVMWGRGATDMKSGVAAFCGAVA
QLAQTGALEKGTVSLAITNDEEADAVNGTKKLMEWAEAQGEKYDFAIVGEPSSFEVFGDS
IKIGRRGSVSGKITVIGKQGHAAYPQRANNPMPVAAEIVRALYVPLDDGTEHFQPTNLEV
TAIDTGNPASNVIPERTTLRFNVRFNDIWTGETLLAEIHRRLAAIELRGCHLEFEQLGPI
SRCFISPPEGHVSHLCDVMEDFNGVRPLLSTIGGTSDARFISLYCPVVECGLIGATMHQV
DERVPVADVERLAEFYATYIASFLARKQA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcgcgccgtcccgctgctcgccgatctgatccgccggccttcggtcaccccg
atcgaagagggcgtgctcgacgtgctcgaagccttcctttctccgctcgggtttgtctgc
acgcggctgaagttcgagggcgacggctcctatccggtcgacaacctctacgccacccgc
aagggcaaagagcccggaccacatctgttgtttgccggtcacaccgacgttgtccctcct
ggggatgtcaccgcctggacccatgatccgttttccggcgaaatcgttgatggcgtcatg
tggggccgcggcgccaccgatatgaaaagcggcgtcgccgccttctgcggtgccgtggcg
cagcttgcccaaactggcgcgctggaaaagggcacggtctctctcgccatcacaaacgat
gaagaagccgacgcggtaaacggcacgaaaaagctgatggaatgggccgaggcgcaaggc
gagaaatatgatttcgccattgtgggcgagccctcctcgttcgaggtcttcggggactcg
atcaagatcgggcggcgcgggtcggtttcgggcaagataaccgttatcggcaagcagggg
cacgcggcctacccgcagcgcgccaacaatcccatgccggtcgcagccgaaatcgtgcga
gcgctttacgtgccgctcgatgacggtaccgagcacttccagcccacaaatctcgaagtc
accgcgatcgacaccggcaatccggcgtcgaatgtcatccctgaacgcaccacgctgcgc
tttaatgtccggttcaacgacatttggaccggcgagacactgcttgccgaaatccaccgt
cggctcgccgcaatcgaattgcgcggctgtcatctcgaattcgaacagctcggtcccatc
tcgcggtgctttatctccccgcccgaggggcacgtgtctcatttgtgcgacgtgatggaa
gacttcaacggcgtccgcccgctcctctcgaccatcggggggacgtcggacgcacggttc
atctcgctttattgccctgtcgtcgaatgcggcctgatcggagcgaccatgcatcaggtc
gatgagcgggtaccggtcgccgatgtcgagcgcctggccgaattttacgccacctacatc
gccagctttctggcaaggaagcaggcatga
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