Pelagibacterium flavum: OF122_17530
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Entry
OF122_17530 CDS
T08676
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pem
Pelagibacterium flavum
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pem03016
]
OF122_17530 (truA)
Enzymes [BR:
pem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
OF122_17530 (truA)
Transfer RNA biogenesis [BR:
pem03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OF122_17530 (truA)
Prokaryotic type
OF122_17530 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Adeno_VII
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
UYQ71820
LinkDB
All DBs
Position
complement(3497395..3498132)
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AA seq
245 aa
AA seq
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MPRYKLTIEYDGTPFVGWQRQADALSVQEAIEIAIEAFSGEAVRTQTAGRTDAGVHARGQ
VAHFDLEREWDPFRVSEALNYHLKPHPIAILDCQLVGGDFEARFSAKARHYRYLILNRRA
RPALEANRVWHVAVPLDEKAMQEAAQTILGRHDFTTFRSAQCQANSPLRTLDRLDVKRDG
DLIIIEASARAFLHHQVRSMTGSLKLVGEGRWPVTGLKAALDAQDRSRCGAMAPSSGLYL
MAIDY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgccccgctacaagctgaccatcgaatatgacggaacgcccttcgtgggctggcagcgc
caggccgatgcgctttcggtgcaggaagcaatcgaaattgccatcgaagccttttccggc
gaggccgtgcgcacccagacggcgggccgcaccgatgcgggggttcatgcacgggggcag
gtggcccatttcgacctcgaacgcgaatgggaccccttccgcgtgtccgaggcgctgaat
taccatctcaagccccacccgatcgccattctggactgccaattggtcggcggggacttc
gaagcgcgcttttcggccaaagcgcgccattatcgctatttgatcctcaatcgccgcgcc
cgtccggctctggaggccaacagggtttggcacgtggcggtgccgctcgacgagaaagcc
atgcaagaggccgcgcagaccattctggggcggcacgatttcacgaccttccggtccgcc
caatgccaagccaattccccccttcgcacgctggacaggctggacgtcaagcgtgacggc
gatctgatcatcatcgaagcgtcggcgcgcgcctttttgcatcatcaggtgcgctccatg
accggatcactgaagcttgtgggggaggggcgctggccagtgactggtctgaaggcggcg
ctcgacgcgcaggacaggtcgcggtgtggggccatggctccatcctccgggctctacctg
atggcgatcgattattag
DBGET
integrated database retrieval system
