Pelagibacterium flavum: OF122_17565
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Entry
OF122_17565 CDS
T08676
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pem
Pelagibacterium flavum
Pathway
pem03030
DNA replication
pem03430
Mismatch repair
pem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OF122_17565
03430 Mismatch repair
OF122_17565
03440 Homologous recombination
OF122_17565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pem03032
]
OF122_17565
03400 DNA repair and recombination proteins [BR:
pem03400
]
OF122_17565
Enzymes [BR:
pem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OF122_17565
DNA replication proteins [BR:
pem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OF122_17565
DNA repair and recombination proteins [BR:
pem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OF122_17565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_30
AAA_16
AAA_22
AAA_5
RuvB_N
AAA_14
AAA_19
AAA_18
nSTAND3
AAA_28
SRP54
TsaE
DUF815
AAA_24
VapE-like_dom
CbiA
Motif
Other DBs
NCBI-ProteinID:
UYQ71827
LinkDB
All DBs
Position
complement(3502307..3504070)
Genome browser
AA seq
587 aa
AA seq
DB search
MARQFPQQRPAMVTPQTPATPYQVLARKYRPSSFESLVGQDAMVKTLGNAFATGRIHHAF
ILTGVRGVGKTTTARILARAFNYADETGPHATLDLSREGVHCAEIIAGTHVDVMEMDAAS
NTGIDSIREINAMTRTPPMSAPYKVFIIDEVHMLSTSAFNGLLKTLEEPPPYVKFIFATT
EIRKVPVTILSRCMRFDLRRISPEVMTGYLSGLLEKEAIPVEPEALSMIVRAGEGSARDC
LSLTDQAIAHGGGQISVQSVRDMLGLADRARIIDLFEKLMGGDIAGALDDTRALYDSGAD
PTTIITDLAELTHLVTRIKIVPSAAEDPVLTPDERSRGAELAQKLGLRILTRTWQILSKG
LAEIAQSGNGLQSAEMVLIRLAYAADLPSPDELIEKLTSQPGDSGPVPSAPAPNGGGGNH
ARAFAPSAAPDPSPQSAPRTEARAVPQSYEQIVALAGEKRDIAVKHALESDIKPVSFEVG
RIEVALTPSANPSIVPMLSARLKEWTGRPWLVTISTKEIAAPTLREARRAAEDNARNAAL
EDPLVKAVMETFPGARLVNIKSRPDLTNELETAAQDFEAPIEPEEDE
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcagttcccccagcaacggcccgcgatggtgaccccccagaccccagcaacg
ccctatcaggttctggcccggaagtaccggccatcgagctttgagagccttgtggggcag
gacgcgatggtcaagacgctgggcaatgcatttgcgaccggccgtatccaccacgccttc
atcctgaccggcgtgcgcggcgtgggtaaaaccaccaccgccagaattcttgcccgcgcc
ttcaactacgccgatgaaaccgggccgcatgcaacgctcgatctgtccagagaaggggtt
cattgcgccgagattatcgccggcacccatgtcgatgtcatggaaatggatgccgcatcc
aataccggcattgattccattcgcgaaatcaacgcaatgactcgcaccccgccgatgagc
gcaccctataaggtgttcatcatcgacgaagtgcacatgctttcgacatcggcgttcaac
gggcttttaaagacactcgaagaaccgccaccttatgtgaagttcatcttcgcaacgacg
gagatccgcaaggtcccggtgaccatcctgtcgcgctgcatgcgttttgacctgcggcgg
atttcgcccgaggtgatgacggggtatctctcaggactgctcgagaaagaggccataccg
gtcgaacccgaggccctctcgatgatcgtgcgcgccggggaaggctccgcgcgtgactgc
ctttcgctgaccgaccaggccatcgctcacggtggcgggcagatcagcgtgcagtcggta
cgcgacatgttggggctcgcggatcgggcgcggatcatcgatctctttgagaaactgatg
ggcggcgacatcgctggcgcactcgacgacacgcgcgcgctttatgattcgggcgctgat
ccgacgacgattatcactgatctggccgagttgacccatctggtaacgcgcatcaagatc
gtgccgtcggccgccgaagatccggtgctgacacctgacgaacgcagccgcggggccgaa
ctggcccaaaagctcggtcttcgcatcctgaccagaacctggcagatcctgtcgaaagga
ctcgccgagatcgcccagtcgggcaacggtctgcaatcggcggaaatggtgctgatccgt
cttgcctatgctgctgatctgcccagccctgacgaactgatcgaaaagctgacaagccaa
ccgggcgattccggcccggtgccgtctgctccggcccccaatggtggtggtggaaatcat
gcgcgcgcctttgcgccgtccgcagcacccgacccgtcaccgcaatcggcgccgcgcacc
gaagcgcgtgctgtcccgcaatcctatgagcagatcgtcgccctggctggcgaaaagcgt
gatatcgctgtcaagcatgctctagaatccgatatcaagccggtgtcctttgaagttggg
cgcatcgaggtggcgctgacgccttctgccaacccttccatcgtgcctatgctgtcggcg
aggctcaaggaatggacggggcgcccttggctcgtcaccatctcgaccaaggagatcgcg
gcacccactttgcgtgaggcgcggcgagcggccgaagataatgcccgaaacgcggcactc
gaagacccgttggtcaaagccgtgatggagaccttccccggcgccaggctggtgaacatc
aagtcgcgtcctgatctgaccaacgagctggaaacggcagcgcaggattttgaagctccc
atcgagccggaggaagacgaatga
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