Pelagibacterium flavum: OF122_17865
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Entry
OF122_17865 CDS
T08676
Symbol
cobN
Name
(GenBank) cobaltochelatase subunit CobN
KO
K02230
cobaltochelatase CobN [EC:
6.6.1.2
]
Organism
pem
Pelagibacterium flavum
Pathway
pem00860
Porphyrin metabolism
pem01100
Metabolic pathways
pem01240
Biosynthesis of cofactors
Module
pem_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
OF122_17865 (cobN)
Enzymes [BR:
pem01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.2 cobaltochelatase
OF122_17865 (cobN)
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Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
Motif
Other DBs
NCBI-ProteinID:
UYQ71883
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Position
complement(3562177..3565896)
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AA seq
1239 aa
AA seq
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MHLLAAQAGALQQEGEAIDLAQTPGDFAFASSADSELAMLAAAADRAGEDGLRLANLMRL
THNFSVDLWCQDTLAHSKLIVIRLIGGSAYWPYGCDEIEMLARQKSIPLAFLPGDAVPDP
VLLSRSTIPEPDWHALHKLFLTGGPDNADAILSAFRALAAGNPIAHAPDPFPAFGFWDRE
RGIVGQLARDVCPEPMGTTREKPAHVPILFYRAVLEGSGTATLEALISGLERHGLAPVPI
VISSLKSPDCAAFVRQALGDIEPAAIFNLIGFALGINDLAPEKNPFALTDAPVIQLVQGS
RPPIMWEADPRGLTSKDLAMQVVLPEIDGRVGALIVGHKAEAVWHERTQCPLTAFTPEPD
GIARATDLAQNYARLRAKSPPERKIGLVLANYPLKDGRLANGVGYDAPQSSVEILKTLAE
AGYHVRPVPPSGTAFIEHLQSGPTNARPRQGTSDATLPIETYKAWLETLHPCIREDVPAR
WGTPEADPFVRGDAFHLPIKIFGNIAILLQPARAYDVPEEISFHDPNLVPPHAYIASYLW
LRHAFGVDALIHNGKHGNLEWLPGKANALDSESYPSVLWGQVPHFYPFIVNDPGEGTQAK
RRTGATIIDHLVPPLTRAETYGPLKDLEALLDEYYAALGMDQRRLESLKRKILDFTRDAR
LDLDLRLPDDETEALNQIDNFLCELKEAQIRDGLHIFGQSPTGTFERDLLVAFARVPRGE
GQGGDASLIRALADDLKLGIDPLSLDLSAPWSGPKPDVLATNGMWRSNGDTIDRLEALAA
DLVTGRAPDPDWTATVEVLDTIETAIRPRLAASGPNEIKSLLDGLAGKFVAPGPSGAPTR
GRIDTLPTGRNFYSVDNRAIPTQTAWALGHKAAENLLKRHYQDHGLWLTSLAMSVWGTAN
MRTGGDDIAQALALIGARPVWQGASLTVSGYEIIPLAKLGRPRVDVTLRISGLFRDAFPA
QIALFDRAIRAIGALDEPIEDNPIAARMRTDALAMMEQGATQDEAGLRAGHRIFGAAPGG
YGAGIGKLVDTGKWAEKSDLAEAVLATGQYAYGAHTEGVPEKTLFAARLKSADAVVHVQD
NAEHDLLDSDQYYQFEGGLSAAVETLSGHKPAAYHLDTSRPETPKVRTLEEEIARVMRAR
VVNPKWIDAMKRHGYRGAFEIIATVDFMFGFAATTGAIKSHHFDLAFAAFIEDDVTRDFL
ITANRFGYDELIEKFSEARIRGFWTPRSNSAYAYLEDET
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcttgccgcccaggccggtgcgctccagcaggaaggcgaggccatcgacctc
gcccagaccccgggcgatttcgccttcgcttcgtccgccgatagcgaactggccatgctc
gccgccgccgccgatagggctggcgaggacggcttgcggctggccaatctcatgcggctg
acccacaatttctcggtggacctctggtgccaagataccctcgctcattccaaactgatc
gtgatccgcctcatcggcggctcggcctattggccctatggctgcgatgaaatcgaaatg
ctggcacggcaaaaatcgattcctctggccttcctgcccggcgacgcggtccccgatcct
gtgctgttgtcccgctccacaatccccgagcccgattggcacgcccttcacaaactgttt
ttgaccggcggccctgacaacgccgatgcgatcctatcggcctttcgcgccctcgctgcg
ggcaatcccatcgcccatgcccccgatcccttccccgccttcggcttctgggatcgggaa
cgaggaattgtcggccagctggcgcgggatgtttgtcccgaaccgatgggaacgacgcgc
gaaaagccggcccatgtgcccattctgttttaccgcgccgtcctcgagggttcgggcaca
gcgacgctcgaagcgctgataagcgggctggagcgtcacggtctggcgccagtgcccatc
gtcatctcctcgcttaaatctcccgactgcgctgcgttcgtgcgccaagctttgggtgac
atcgagcctgccgccatcttcaacctcatcggcttcgcccttggcatcaacgatctcgcc
cccgagaaaaacccgttcgccctcaccgatgcgccggtgatccagctcgtccagggctcg
cgcccacccatcatgtgggaagccgacccgcgcggcttgacctccaaggacctcgccatg
caggtggtcctgcccgaaatcgatggccgcgtcggcgcgctgatcgtcggccacaaggcc
gaagcggtctggcacgagcgcacccaatgcccgctcaccgccttcacccccgaacccgac
ggcatcgcccgcgccaccgacctcgcgcaaaactacgcccgcctgcgcgccaaatcgccc
cccgagcgcaagatcggtctcgtcctcgccaactacccgctaaaggatggccgcctcgcc
aacggcgtcggctatgacgccccccagtcgagcgtcgaaattctcaaaaccctcgctgaa
gcgggctatcatgttcggcctgttccgccgtcgggcaccgccttcatcgaacacctccaa
tccggccctaccaacgcccgcccccggcagggcacttcggacgccacccttccgattgaa
acctacaaggcctggctcgaaacccttcacccctgcatccgcgaggatgtccccgcccgc
tggggcacgccggaagccgatcccttcgtgcgcggcgacgcctttcatctgcccataaaa
atcttcggcaacatcgccatcctgctccagccggcccgcgcctacgatgtgcccgaggag
atcagtttccacgatcccaatctcgtgcctcctcacgcctatatcgcctcctatctctgg
ctgcgccatgcgttcggcgtcgacgctcttatccacaatggcaagcacggcaatctcgaa
tggctgcccggcaaggccaatgccctcgacagcgaatcctacccctcggtcctctggggg
caggtgccccatttctaccccttcatcgtcaacgatccgggcgaaggcacccaggccaaa
cgccgcaccggcgccaccatcatcgaccatctggtcccccctctgacccgcgccgaaacc
tacggcccgctcaaggacctcgaagccctgctcgatgaatattatgctgccctcggcatg
gaccagcggcgtctggagagcctcaaacgcaagatcctcgatttcacccgcgacgcccgc
ctcgatctcgatctgcgcctgcccgacgatgaaaccgaagcgctcaaccagatcgacaat
ttcctgtgcgagttaaaggaagcccagatccgcgacggcctgcacatcttcggccagtcc
cccaccggcacattcgagcgcgatctgctcgtcgccttcgcccgcgtcccgcgtggagaa
gggcaggggggcgatgcttcgctcatccgcgcgttggccgacgatctcaagctcggcatc
gatcccctctccctcgacctttccgccccctggagcggccctaagccggatgtcttggcc
accaatgggatgtggcgctccaacggagacaccatcgaccgcctcgaagccctcgccgcc
gatctcgtcaccggccgcgcgcccgatcccgactggaccgccacggtggaagtcctcgat
accatcgaaaccgccatccgtccgcgcttggccgcttccggtcccaacgagatcaaatcg
ctcctcgacggcctcgccggaaagttcgtcgcccccggcccctcgggtgcccccacccgt
ggccgcatcgatacgctgcccaccggccgcaatttctattcggtcgataaccgcgccatc
cctacccagacagcatgggcactggggcacaaagccgccgaaaatctcttgaagcgccac
tatcaggatcatggcctctggctcacttcgctcgccatgagcgtctggggcaccgccaac
atgcgcaccggcggagacgacatcgcccaggctctggccctgatcggcgccaggcccgtc
tggcagggcgcctcgctcaccgtttcgggctatgagatcatcccgctcgccaagctcggc
cgcccccgtgtcgatgtcaccttgcgcatttcgggcctgttccgcgatgccttccccgcc
cagatcgccctgttcgatcgcgccatccgcgccatcggggccctggatgaacccatcgag
gacaaccccatcgccgcccgcatgcgcaccgacgctctggccatgatggaacaaggcgcc
acacaggacgaagcgggtttgcgcgccggccaccgcattttcggcgctgcgccgggaggc
tatggtgcaggcatcggcaagctggtcgatactggcaaatgggccgaaaaatcggacctc
gccgaagccgtcctcgccaccggccaatacgcctatggcgcccacaccgaaggcgtgccc
gaaaaaacgctgtttgctgcccgcctcaaatcggctgatgccgtcgtccatgtccaggac
aatgccgagcacgatctgctcgattctgatcagtattatcagttcgaaggcggcctttcc
gccgccgtcgaaaccctctcgggccacaagcccgccgcctatcatctcgatacctcgcgt
cccgaaaccccaaaagtccggacgctcgaggaagaaatcgcccgtgtgatgcgcgcccgc
gtggtcaatcccaaatggatcgacgccatgaagcgccacggctatcgtggcgccttcgag
atcatcgcgacggtcgatttcatgttcggctttgccgccaccacaggcgccatcaaatcc
caccatttcgacctggccttcgctgccttcatcgaggacgacgtcacccgcgatttcctc
atcaccgccaaccgctttggctatgatgagctgatcgaaaagttttccgaagcccgcatc
cgcggcttctggaccccccgctccaattccgcctacgcctatctcgaggacgagacatga
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