Pelagibacterium flavum: OF122_17925
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Entry
OF122_17925 CDS
T08676
Name
(GenBank) transcriptional repressor
KO
K09823
Fur family transcriptional regulator, zinc uptake regulator
Organism
pem
Pelagibacterium flavum
Pathway
pem02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OF122_17925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pem03000
]
OF122_17925
Transcription factors [BR:
pem03000
]
Prokaryotic type
Helix-turn-helix
Fur family
OF122_17925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FUR
TrmB
RHH_5
WHD_RNase_R
DUF4777
Endonuclease_7
Motif
Other DBs
NCBI-ProteinID:
UYQ71894
UniProt:
A0ABY6INC9
LinkDB
All DBs
Position
3575449..3575847
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AA seq
132 aa
AA seq
DB search
MSAHSDLTRNQSLVLDRLEKADAPMSAYAILDQLRDDGLRAPLQVYRALEKLLDMGLAHR
LESMNAFVACAHPHCHDSGLIAFAICEKCGQVSEFSDDVVRERLTGWADREGFVVKRTTM
EIRGECRVCAAA
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgcattccgatctcacccgcaaccagtcgctggtgctcgaccggctggaaaag
gccgacgcgcccatgagcgcctacgcgatcctcgaccagttgcgcgatgacgggttacgg
gcaccgctgcaggtctatcgggcgctcgaaaagctgctcgatatgggactggcgcaccgg
ctggaatcgatgaacgcgtttgtcgcctgcgcgcatccgcattgccatgattcagggctg
atcgcctttgcgatctgcgagaagtgcgggcaggtttccgagttctctgacgatgtggtt
cgggagcgactgacgggctgggcggaccgggaggggtttgttgtcaagcgcacgacgatg
gagatacgcggggagtgtcgggtatgtgcggccgcgtga
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