Pelagibacterium flavum: OF122_18710
Help
Entry
OF122_18710 CDS
T08676
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
pem
Pelagibacterium flavum
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pem02000
]
OF122_18710
Transporters [BR:
pem02000
]
Other transporters
Pores ion channels [TC:
1
]
OF122_18710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
DUF748
Motif
Other DBs
NCBI-ProteinID:
UYQ72039
LinkDB
All DBs
Position
complement(3742918..3747258)
Genome browser
AA seq
1446 aa
AA seq
DB search
MRVLAAIAIVSLAMPLPAMAQEPERESLMDMLARASQLNENEQRGALVGFVEDQISTPDR
QIRLTGIDGALSSNASIDQITISDTEGIWLIVENAQLQWNQGALLFGRLEIQSLSADSIA
YIRNPVSTEAPTAPSPEAGGFSVPELPVAVILESLSVPNVRFGEQVFGLGSEISLAGSMT
LEGGAIDARLDIERLDGPGGTLDLDLQYANQTREIDLGLELIEPEDGIVANLLNIEGRPE
IALGLQGAGPIDDLDIDLTFDADGNRILTGEGTLDQTAEGLAIAADLGGPLSTVLPAAYR
DFFGEQTALSLDALMRDAGGFEISNLSVSGGELSLLANAATTADGFLSRLDMSGEIAPVS
GDTVTLPVPGASTRIERAGFEVDYGDEGSDQWSGRFELLGFSTPDFAAQSLVLDTSGVAA
DLDNPQARRVTFNGDGRLEGVTSSSEEISQALGSSFGFGLAGMWEAGEPVTLAQLRLVAQ
ALNFEAAGQIADNVFTGDLALTTESIAPFSGLAERDLSGAIALSATGTISPLSGGFDLTL
LGNGTNLSVDDEIADNLLEGTVALSGRVARSEAGLEAEDFRIANSQIEMVADGTYATGTA
DFTFDLALADLALINPQMSGRLTATGTAQGAEGTIALTADVDISEGALDGRTLRNANIGF
DGTSSEEGLVGALTGTASLDGFRVTLSSDIDNNAERLRLSDISFDAPGAALSGNLTRFAD
GLIDGRLTLDAPNIETAAALALAEASGTVNADIILNPEGEAQNAEVTASLDAVRFNDITI
GSANAEATIADLFGVPVIDGSINGADIVAAGTNVQSVSLTATASEETTRFSADGSLNAGT
DLALAGLLEPIAEGYRVALESFRLTQGQLAASLAQPAELTVANETVSFSGIELAVGSGRV
TATGSAGQDLDIALDVTAFPLTIANTIVPDLGLAGTVSGTAQISGEASDPRASFSVEANG
INAAAISDFGIAPLTLSAQGSFAENTITLSQARANGSGGLSATAQGTVPLEGAGLNIAIN
GSAPLSLANRFVADRGAQISGTANLDARVTGRIDNPQFSGTVSVADGEFIDPGLALRLVG
ITGNASLNADRVTINTLTANLATGGSVSASGFVGLDAGLNSDIAITFDQARYADGNLVVA
TLNGDLRLTGPIANGGRLAGNIDIARADITVPDGFGGAVSVIDVDHVRPPSPVAATLARA
RIDQRASSTTTASVPLELAITISAPNQVFIRGRGLDAEVGGQVQINGNVADVQPVGALEL
IRGRLSILGQRIDFDEGTVTLIGDLDPFINLVARTQGNDITVIVTVSGRASSPEVTFSSD
PMLPQDEVLARLIFDRGVGELSPLQLAQLAAAAAELAGGGSGSGSLLGSLREAAGLDDLD
IVTDAQGNVGVRAGTYIDDNIYLGVEAGAGESRVTIDLDITEQLRARGTTSTTGNSGVGL
FYEQDY
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttcttgcggcaatcgcaatcgtctcgctcgccatgccgctcccggccatggcg
caggaacccgagcgcgaaagccttatggacatgctggcccgcgccagccagctcaatgaa
aacgaacagcgcggggcgcttgtcgggttcgtcgaagatcagatatccacccccgaccgc
cagatcaggctcacgggcatcgatggtgccctctcgtcgaacgcctcgatcgaccagatc
accatttcggacaccgagggcatctggttgattgttgaaaatgcgcaattgcagtggaac
cagggcgcgctgctgttcgggcggctggaaatccagtcgctttccgccgattcaatcgcc
tatatccgcaatccggtgtccactgaagcgcccaccgccccgtcccccgaggcgggcggg
ttctccgttcccgaattgcccgtcgcggttattctcgaaagcctctcggtccccaatgtg
cggtttggcgagcaggtctttggcttaggctcggaaatctcgctggccggatcgatgacg
ctggagggtggcgccatcgatgctcggctcgatatcgaacgcctcgacggaccgggcggc
acgctcgacctcgacctgcaatacgccaaccaaacgcgcgaaatcgatctcgggctcgaa
ctcatcgaaccggaagacggtatcgtcgccaatctcctcaacatcgaggggcgtccggaa
attgcgctgggcctgcaaggcgccggacccatcgatgatctcgatatcgatctgaccttc
gatgccgatggcaaccgtatcctgaccggggagggcaccctcgatcagactgccgagggt
ctcgcgatcgccgccgatctgggtggtccgctatcgaccgtcctgcccgcagcctatcgc
gacttctttggcgaacagaccgcgctttcactcgacgcgctgatgcgcgatgccggtggc
tttgaaatctccaacctttcggtttcgggcggcgaactgtcgctactggccaacgccgcc
accacggcggacggctttttgagccggctcgacatgagcggcgaaattgccccggtttcg
ggcgatacggtcacactgccggtgcccggcgcctccacccgtatcgagcgcgccggtttc
gaggtcgattacggcgatgagggatccgaccaatggtcaggacgcttcgagttgctcggc
ttttccacccccgatttcgcggcgcagagcctggtgctcgacacatcgggcgtcgccgcc
gatctggacaatccgcaggcccgtcgcgtcacctttaatggcgacggcaggctcgaaggc
gttacctcctcgtccgaagaaatttcccaggccctcgggtcctctttcggctttggcctg
gccggcatgtgggaggcgggtgagcccgtcacgctggcccagcttcgcctcgtggcccag
gcgctcaatttcgaagccgccggccagatcgccgataacgtctttaccggcgatcttgcg
ctcaccaccgagtccattgcccctttctcgggtctcgccgaacgcgacctttcaggcgcc
attgcgcttagcgccaccggaacgatttcgcccctgtcgggcgggttcgacctcacgctt
ttgggcaatggtaccaacctttcggtcgacgacgaaatcgccgacaatctgcttgaaggc
actgtggccctttcgggccgggtggcgcgcagtgaagccgggctcgaggccgaggatttc
cgcattgccaacagccagatcgaaatggtcgccgatggcacctacgccaccggtactgcc
gatttcaccttcgatctggcgctggccgatcttgcgctgatcaacccccaaatgtccggc
cgcctgacggcgacgggcacggcccagggtgctgagggtaccattgcgctgaccgctgac
gtcgatatttccgaaggtgcgctcgatggtcgcaccctgcgcaacgccaatatcggcttt
gacggcacctccagcgaagaagggctcgtgggcgcactcaccggcaccgcatcgcttgac
ggtttccgcgttactctttcaagcgacatcgacaacaatgccgagcgcctgcggctgtcc
gatatcagtttcgatgctcccggcgcggcgctctcgggcaatctcacccgcttcgccgat
ggcctgatcgatggccggctgacccttgatgcgcccaatatcgaaaccgccgccgccctc
gcgctggccgaggccagcggcacggtcaacgccgatatcatcctcaaccccgagggtgaa
gcccagaatgccgaggtcacggcctctctcgacgccgtcaggttcaacgatatcacaatc
ggctcggccaacgccgaagccacgattgccgacctgttcggcgtcccggtgatcgacggg
tccatcaacggcgccgatatcgttgccgcaggcaccaatgtccagtccgtttcgctcacc
gcaaccgcaagcgaagagacgacacggttttcagccgatggctcgctcaacgcgggaacc
gacctggcgctggccggtctgctcgagcccatcgccgaggggtaccgggtagcgctcgaa
agtttccgcctcacccagggccagcttgccgcaagtctcgcacaaccggccgaactgacc
gtcgccaacgagacggtttcgttctcagggatcgagctggcggttggctcgggccgtgta
accgccacgggcagcgcgggacaagatctcgatatcgcgctcgatgtcacagccttcccg
ctcaccatcgccaacaccatcgttcccgatctggggttggccgggactgtttcgggcacc
gcgcaaatctcgggcgaagccagcgatccgcgggccagcttttcggtggaagcgaacggc
atcaacgccgcagcgatctccgacttcggcatcgcgccgctcacgctgtccgctcagggc
agtttcgccgaaaacacgatcaccctctcccaggcccgcgccaatggatcgggcgggctc
agcgcaacggcgcagggcactgttccgcttgagggagccgggctcaatatcgccatcaac
ggctcagcgccgctctcgctcgccaaccggttcgtcgccgatcgcggggcacagatttca
ggcacggcgaatctggacgcccgggtgacagggcgcatcgacaatccgcaattttcgggc
accgtttcagtcgccgatggcgaattcatcgatcccggacttgcgctgcggctggtcggc
atcaccggcaatgcttcgctcaacgcagaccgagtgaccatcaacacgctcacggcaaac
cttgccacgggcggttcggtctcggcctcaggctttgtgggccttgatgcgggcctcaat
tccgatatcgccatcactttcgatcaggcgcgctatgccgatggcaatctggtggtcgcc
accctcaacggcgacctgcggctcaccggccccatcgccaatggcgggcgactggccgga
aacatcgacatagcgcgcgccgatatcacggttcctgacgggttcgggggcgcggtgagc
gttatcgacgttgatcatgtccgcccgccttcgccggtcgccgcgaccctggcgcgggcc
cgcatcgaccagcgcgcgtcgagcaccacgacggccagcgtaccgctcgagcttgcgatc
accatctctgcacccaatcaggtgttcattcgcggccgtggcctcgacgcggaagtgggt
ggccaggtccagatcaacggaaatgtggccgatgtccagcccgtcggcgcgctcgaactg
atccgcggacgcctctcgattctgggccagcgcatcgatttcgacgaaggcaccgtcacc
ctgattggcgatctcgatcccttcatcaacctcgtggcccgcacccagggcaatgacatt
acggtcatcgttacggtttcaggccgcgcatcatcgcccgaggtgacattctcgtccgat
cccatgttgccccaggacgaagttctggcccggctgatcttcgatcgcggcgtgggcgaa
ctttcgccgctgcaactggcgcaactggcggccgcggcggccgaactggccggcggcggc
agtggttcgggttcgctcctgggctcgctgcgcgaggccgcggggctcgacgatctcgac
atcgtcaccgatgcacaaggcaatgtcggcgtgcgcgccggcacctatatcgatgacaat
atctatctcggcgtcgaggccggcgcgggggaaagccgggtcaccatcgatctcgacatc
accgagcaactgcgcgcccgaggcacgaccagcacgacgggcaattcgggtgtgggattg
ttctacgagcaggattactga
DBGET
integrated database retrieval system
