Pelagibacterium flavum: OF122_19345
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Entry
OF122_19345 CDS
T08676
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pem
Pelagibacterium flavum
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pem03032
]
OF122_19345
03036 Chromosome and associated proteins [BR:
pem03036
]
OF122_19345
03400 DNA repair and recombination proteins [BR:
pem03400
]
OF122_19345
DNA replication proteins [BR:
pem03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OF122_19345
Chromosome and associated proteins [BR:
pem03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
OF122_19345
DNA repair and recombination proteins [BR:
pem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
OF122_19345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_1
HU-DNA_bdg
HU-CCDC81_bac_2
CATASP
Motif
Other DBs
NCBI-ProteinID:
UYQ72161
LinkDB
All DBs
Position
complement(3878905..3879186)
Genome browser
AA seq
93 aa
AA seq
DB search
MIKSELIEKLAAENPHLFHRDIENIVNAILDEIGDALARGDRVELRGFGAFSVKNRPARI
GRNPRTGEQVDVGEKYVPQFKAGKEIRERLNGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgataaagtccgaactcattgaaaagctcgcggcggaaaacccgcatcttttccatcgc
gatatcgaaaacatcgtcaacgccatcctcgatgagatcggtgacgcgctggcccggggc
gaccgggtcgaattgcgcggcttcggcgcgttttcggtcaagaaccgcccggcccgcatc
ggccgcaatccgcgcaccggcgaacaggtcgatgtgggcgaaaaatacgtgccgcaattc
aaggccggcaaggaaatccgtgagcggctcaacggcggctga
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integrated database retrieval system
