Pelagibacterium flavum: OF122_19395
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Entry
OF122_19395 CDS
T08676
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
pem
Pelagibacterium flavum
Pathway
pem03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
OF122_19395 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pem03011
]
OF122_19395 (rpsA)
Ribosome [BR:
pem03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
OF122_19395 (rpsA)
Bacteria
OF122_19395 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
DUF5446
RuvA_N
Motif
Other DBs
NCBI-ProteinID:
UYQ72170
LinkDB
All DBs
Position
complement(3885523..3887226)
Genome browser
AA seq
567 aa
AA seq
DB search
MANQTASAEDFEQLLFESFQDIDPVEGTVVKGKVVAIEKDLAIIDVGLKTEGRVPMKEFG
AAGRDGTIAVGSEVEVYVDRVENAMGEAVLSREKARREESWVRLEVLYDKGEKVEGQIFN
QVKGGFTVDLDGAVAFLPRSQVDIRPIRDIAPLMNVPQPFQILKMDKRRGNIVVSRRAIL
EESRAEQRSEIVQQLEEGQVVEGVVKNITDYGAFVDLGGIDGLLHVTDIAWRRVNHPNEV
LAIGETIKVQIIRVNQESHRISLGMKQLQADPWEGIAAKYPVEAKFTGRVTNITDYGAFV
ELEPGIEGLIHVSEMSWTKKNVHPGKIVSTSQEVEVVVLEVDPEKRRISLGLKQTLANPW
ESFADKFPIGAEIEGEVKNKTEFGLFIGLDGDVDGMVHLSDLDWNRPGEEALEDYNRGDI
VKAKVLDVDIDKERISLGIKQLGSDAMADAAAGSDGLRKGAIVTTEVTAVTDGGLEVRIA
DTDLTAFIRRSDLSRDREDQRPERFAVGEKVDARITQFDKKTRRIGLSIKALEIAEEKEA
VAQYGSSDSGASLGDILGAALKGQDKK
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccagaccgcatctgcagaagatttcgaacagctcctttttgagagctttcag
gacatcgatcccgtcgagggcaccgttgtcaaaggcaaggtcgtcgcaatcgaaaaagac
ctcgccatcatcgacgtgggattgaagaccgaaggccgcgtgccgatgaaggaattcggc
gccgccggccgcgacggcaccattgccgtcggctcggaagtcgaagtctatgtcgaccgc
gtcgaaaacgcgatgggcgaggctgtcctctcccgtgagaaggcccgccgcgaagaaagc
tgggtccgcctcgaagtcctttacgacaagggcgaaaaggtcgaaggccagatcttcaac
caggtcaagggcggcttcaccgtcgatctcgatggcgccgtggccttcctgccgcgctcc
caggtcgatatccgccccatccgcgacatcgctcccctgatgaacgtgccgcagcccttc
cagatcctgaaaatggacaagcgccgcggcaatatcgtcgtttcgcgccgcgccattctc
gaagaatcgcgcgccgaacagcgttcggaaatcgtccaacagctcgaagagggccaggtg
gtcgaaggcgtcgtcaagaacatcaccgattacggtgcgttcgttgatctgggcggcatc
gatggcctgctccacgtcaccgacatcgcatggcgccgcgtcaatcaccccaacgaagtc
ctggcgatcggcgagaccatcaaggtccagatcatccgcgtcaatcaggaaagccatcgt
atttcgctgggcatgaagcagctccaggccgatccctgggaaggcattgccgccaagtat
ccggtggaagccaagttcactggccgcgtgaccaacatcaccgattacggtgcgttcgtc
gaactcgagccgggcatcgaaggcctgatccacgtctcggaaatgagctggaccaaaaag
aacgtccatccgggcaagatcgtctcgacctcccaggaagtcgaagtggtcgttctcgaa
gtcgatcccgaaaagcgccgcatctcgcttggtctcaagcagacgctcgccaatccgtgg
gaaagctttgccgacaagttcccgatcggtgccgagatcgaaggcgaagtcaagaacaag
accgaattcggcctgttcatcggcctcgacggcgatgtggacggcatggtccacctttcc
gatctcgactggaaccgtccgggcgaagaagcgcttgaggattacaaccgtggcgacatc
gtcaaggccaaggttctcgacgtcgatatcgacaaggaacgcatttccctgggcatcaag
cagcttgggtccgatgcaatggccgatgccgctgccggctccgatggcctgcgcaagggc
gcgatcgtcaccaccgaagtcaccgccgttaccgatggtggcctcgaagtgcgcatcgcc
gacaccgacctgacggccttcatccgccgctccgatctgagccgcgaccgtgaagaccag
cgccccgaacgcttcgccgtcggcgaaaaggtcgatgcccgcatcacccagttcgacaag
aagacccgccgcatcggcctttcgatcaaggccctggaaatcgccgaagaaaaagaagcc
gtcgctcagtacggttcctccgactccggcgcctccctcggcgacatccttggcgcagcc
ctcaagggccaggacaagaagtaa
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