Pelagibacterium flavum: OF122_19645
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Entry
OF122_19645 CDS
T08676
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pem
Pelagibacterium flavum
Pathway
pem03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OF122_19645 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pem03400
]
OF122_19645 (mutM)
Enzymes [BR:
pem01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
OF122_19645 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OF122_19645 (mutM)
DNA repair and recombination proteins [BR:
pem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OF122_19645 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
UYQ72215
LinkDB
All DBs
Position
3928497..3929360
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVETVRRGLAPFIEGARIESVTLNRPDLRFPFPEGFVSRLEGQTITHLGRRAKYL
IATLSDGGAWLSHLGMTGAFLVADRPLDEASRLNKGDGTGKHVHVVASLTHPSRGRVTLS
YSDPRRFGFMDLFAPGAANPFTDSLGPEPLGNDLSAPYLAQRLKNKKGPIKTVLLDQRVI
AGLGNIYVCEALYLSGIDPRRAGGTLNGGEIEKLVAAIRQVLAAAIAAGGSTLKDFAKAD
GQPGYFQHSFAVYGHEDDPCPRPGCGGTTERIVQAGRSTFFCPACQR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgcccgaagttgaaaccgtgcggcgcggactggcccccttcatcgagggc
gcgcggatcgagagcgtcacgctcaaccgtcccgacctgcggtttccgtttcccgagggg
ttcgtttcccggctcgaaggacagacgatcacccatcttgggcggcgggccaaatatctg
atcgcgacgctctcggatggcggagcgtggctctctcatctggggatgaccggggcgttt
ctcgtcgccgaccggccgctcgacgaggcgagccgtctcaacaagggcgatggcaccggc
aagcatgttcatgtggtggcgagcctcacccatccttcgcgcgggcgcgttactctatcc
tatagcgatccgcgccggttcgggttcatggacctgtttgcgcccggggcggccaacccg
ttcaccgattctctgggtcctgaacccttggggaacgatctgagcgcgccctatctggcg
caaaggctgaaaaacaagaaggggccgatcaagacggtgctgctcgaccagcgggtgatc
gccgggctgggcaatatctatgtgtgcgaggcactgtatctgagcggaatcgatccgcga
cgggccggcggcacactcaatggcggcgagatcgaaaagctcgtggcggcaatccggcag
gtgctggcggcggcgatcgcggcggggggctcgacgctcaaggattttgcaaaggcggac
ggccaaccgggctatttccagcactcctttgcggtgtatggccatgaggatgatccctgc
ccgaggccgggatgcggcggaacgacagaaagaatcgttcaagcggggcgcagcacattt
ttttgcccggcgtgccagcgctaa
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integrated database retrieval system
