Pseudomonas entomophila: PSEEN0076
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Entry
PSEEN0076 CDS
T00362
Symbol
polA
Name
(GenBank) DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5' exonuclease
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pen
Pseudomonas entomophila
Pathway
pen03030
DNA replication
pen03410
Base excision repair
pen03420
Nucleotide excision repair
pen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSEEN0076 (polA)
03410 Base excision repair
PSEEN0076 (polA)
03420 Nucleotide excision repair
PSEEN0076 (polA)
03440 Homologous recombination
PSEEN0076 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pen03032
]
PSEEN0076 (polA)
03400 DNA repair and recombination proteins [BR:
pen03400
]
PSEEN0076 (polA)
Enzymes [BR:
pen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSEEN0076 (polA)
DNA replication proteins [BR:
pen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PSEEN0076 (polA)
DNA repair and recombination proteins [BR:
pen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PSEEN0076 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSEEN0076 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
CAK13070
UniProt:
Q1IGY2
LinkDB
All DBs
Position
71569..74337
Genome browser
AA seq
922 aa
AA seq
DB search
MILLMSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSLFA
VVFDAKGGTFRDAMFAEYKANRPSMPDDLRVQVEPLHASVRALGYPLLCVEGVEADDVIG
TLARSSAAAGRPVIISTGDKDMAQLVDGHVTLVNTMTGSVLDVAGVHEKFGVGPEHIIDF
LALMGDKVDNIPGVPGVGEKTAVGLLTGIGGGLSDLYQNLDKVPALAIRGAKTLPAKLEE
HRDAAFLSYELATIKCDVELDVEVDALVCGEPDREALLALYTEMEFKSWVAEVQRSAPRT
GDSDAAVAAQEAPEAKVEPKYETILDQARFDAWLEKLRQAPLFAFDTETTGLDAQQASIV
GLSFAVEPNEAAYVPLAHDYEGAPAQLDREAVLLALKPLLEDPAKGKIGQNAKYDINILA
NGSPAILMRGVAYDTMLESYVLDSTATRHDMDSLAQKYLDHTTIGFEDIAGKGAKQLTFN
QIPLEKAGPYAAEDADVTLRLHHALQARLANTPSVLPVLMDIEMPLVPVLAKIERQGALV
DAALLGVQSGELGAKLVELEREAYALAGEEFNLGSPKQLGAILYDKLGMPVLSKTAKGQP
STAEAVLDDLAEQGYPLPKVLMQYRSLSKLKSTYTDKLPGQINPRTGRIHTSYQQAVAAT
GRLSSSDPNLQNIPVRTAEGRRIRQAFVASPGYKLLAADYSQIELRIMAHLAKDEGLLHA
FRNDLDVHRATAAEVFGVALADVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQD
YIDRYFARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPDINAKNPALRKGAERTAINA
PMQGTAADIIKRAMVAVDNWLTDSKLDARVILQVHDELVLEVREDLVEQVKDEIRGYMSG
AAELDVPLLVEVGVGSNWDEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
ttgattctcctcatgagccaagcgcccctcgtcctggtggacggttcctcctacctctac
cgcgccttccacgcgctgccaccgctgactacttccaaaggcctgccgacgggcgcggtc
aagggtgtgctgaacatgctcaagagcctgcgtaagcagtacccggacagcctgttcgcg
gtggtcttcgacgccaagggcggcaccttccgcgacgccatgttcgccgagtacaaggcc
aaccgcccgagcatgcccgacgacctgcgggtgcaggtcgagccgctgcacgccagcgtg
cgcgcgctgggttacccgctgttgtgcgtcgagggcgtggaggcggacgatgtgatcggc
accctggcccgcagcagcgcggcggcgggccgcccggtgatcatctcgactggcgacaag
gacatggcccaactggtggacggccacgtcacgctggtcaacaccatgaccggcagtgtg
ctggacgttgccggcgtgcacgagaagttcggcgtgggtcccgagcacatcatcgatttc
ctcgccctgatgggcgacaaagtcgacaacatccccggcgtgccgggcgttggcgagaag
accgccgtgggcctgctgaccggaatcggtggcggcctgagcgacctgtaccagaacctc
gacaaggtcccggccctggccattcgtggcgccaagaccctgccggccaagctcgaggag
caccgcgacgcggccttcctctcctatgagctggccaccatcaagtgtgatgtggaactg
gatgtcgaggtcgacgcgctggtctgcggcgagccggatcgtgaagcgctgctggccttg
tacaccgagatggagttcaagagctgggtcgccgaagtgcaacgaagcgcgccccgcacg
ggtgacagcgacgctgctgttgcagctcaagaggcacctgaagccaaggtcgaacccaag
tacgagaccatcctcgaccaggcgcgtttcgatgcctggctggaaaagctgcgacaggcg
ccgctgttcgccttcgacaccgaaaccactggccttgatgcccaacaggccagcatcgtc
ggcctgtcgttcgccgtcgagcccaacgaagccgcctatgtaccgctggcccacgactac
gaaggtgccccggcccagctggaccgcgaagccgtgctgctggcactcaaacccctgctg
gaagacccggccaagggcaagatcggccagaacgccaagtacgacatcaatatcctggcc
aacggcagcccggcgatcctgatgcgcggcgtggcctacgacaccatgctcgagtcctac
gtgctcgactccaccgccacccgccacgacatggacagcctggcgcagaagtacctggac
cacaccaccatcgggttcgaggacatcgcgggcaagggcgccaagcaactgaccttcaac
cagatcccgctggagaaggccggcccctacgccgccgaggatgccgacgtcaccctgcgc
ctgcaccacgcgttgcaagcgcgcctggcgaatacccccagcgtgctgccggtgctgatg
gacatcgagatgccgctggtgccggtgctggccaagattgaacgccaaggagcactggtt
gatgccgcgctgctcggcgtgcagagcggtgagctgggcgcgaagctggtcgagctggag
cgcgaggcgtatgccttggccggcgaggagttcaatctgggctcgcccaagcagctgggc
gcgatcctctacgacaaactgggcatgccggtgctgagcaagacggccaagggccagccc
tcaaccgccgaggcggtgctcgatgacctggccgagcagggctacccgctgcccaaggtg
ctgatgcaataccgcagcctgagcaagctcaagagcacctacaccgacaagctgccgggg
cagatcaaccctcgcaccgggcgtatccacacctcctaccagcaagcagtcgccgccacc
gggcggttgtcgtccagcgacccgaacctgcagaacatcccggtgcgtaccgccgaaggc
cggcgtatccgccaggccttcgtcgccagtcccggctacaagctgctggcggcggactat
tcgcagatcgagctgcgcatcatggcccacctggccaaggacgaaggcctgctgcatgcc
ttccgcaacgatctggacgtgcaccgcgccaccgccgccgaagtgttcggcgtggctctg
gcggacgtcaccaccgaccagcgccgcagcgccaaggcgatcaacttcggcctgatctac
ggcatgagcgcgttcggcctggccaagcagatcggcgtcgaccgcaagcagtcccaggat
tacatcgaccgttatttcgcccgctatcccggcgtgttggcctacatggagcgcacccgc
gcccaggccgccgagcaaggcttcgtcgagaccctgttcggccgccgcctgtacctgccg
gacatcaacgccaagaacccggccctgcgcaaaggcgccgagcgcaccgcgatcaacgcc
ccgatgcagggcaccgcggcggacatcatcaagcgcgccatggtggcggtggacaactgg
ctgaccgacagcaaactggatgcgcgggtgatcctgcaggtgcacgacgaactggtgctg
gaagtgcgtgaggatctggtcgagcaggtgaaagatgaaattcgcggttacatgagcggt
gccgcggaactcgatgtgccgctgctggtggaagtgggcgttggctcgaattgggacgaa
gctcactaa
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