Pseudomonas entomophila: PSEEN0613
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Entry
PSEEN0613 CDS
T00362
Symbol
rtcR
Name
(GenBank) sigma-54 dependent transcriptional regulator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
pen
Pseudomonas entomophila
Brite
KEGG Orthology (KO) [BR:
pen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pen03000
]
PSEEN0613 (rtcR)
Transcription factors [BR:
pen03000
]
Prokaryotic type
Other transcription factors
Others
PSEEN0613 (rtcR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA
AAA_16
AAA_22
AAA_30
MCM
NACHT
AAA_2
AAA_33
AAA_7
AAA_19
bpMoxR
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
CAK13554
UniProt:
Q1IFK0
LinkDB
All DBs
Position
complement(623267..624850)
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AA seq
527 aa
AA seq
DB search
MTKPLVAIGFLGTTLDRNGKGAARWNKWRPTIGLCQQPDLPIDRLELIHGPSARDQSLAD
RIRGDIQQVSPGTEVRLHPLALRNPWDFEEVYGALHDFASGYSFDTEHEDYLVHITTGTH
VAQICWFLLTEARYLPARLVQTSPSRKQDENSDPAGIATLIDLDLSRYDPIASRFRREQV
EGQSLLKSGIATRNPDFNRTIEQIERVALRSKAPMLLVGPTGAGKSFLARRVHELKRGRH
QLGGRFIEVNCATLRGDGAMSTLFGHAKGAFTGAQNARDGLLRAADGGMLFLDEIGELGA
DEQAMLLKAIEEKRFFPLGADREVESDFQLIAGTHRDLRAKVADGSFREDLFARINLWTF
ALPGLAERREDIEPNLDFELQRHAREQGRQVRFNLEAKRRYLAFAHASEARWAGNFRELS
ASITRMATLADSGRIDEVLVEEEIGRLRYAWGLELAAEPLLAGRELDLFDQVQLQAVLEV
CRRAPSLSEAGRQLFAVSRQEKANPNDADRLRKYLARFGLDWQQIRG
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcccctcgtcgccatcggctttctcggcaccaccctcgaccgcaacggcaag
ggtgcggcgcgctggaacaagtggcggccgaccatcggcctgtgccagcaacccgacctg
cccatcgaccgcctggagctgatccacggccccagcgcccgcgaccagagcctggccgac
cgcatccgcggcgacatccagcaggtctcgcccggcaccgaggtgcgcctgcacccgctg
gcgctgcgcaacccgtgggacttcgaagaggtctacggcgccctgcacgacttcgccagc
ggctacagcttcgataccgagcacgaggactacctcgtgcacatcaccaccggtacccac
gttgcgcagatctgctggttcctgctcaccgaggcgcgctacctgccggcacgcctggtg
cagacctcgccctcgcgcaagcaggacgaaaacagcgacccggccggcatcgccaccctg
atcgacctcgacctgtcgcgctacgacccgatcgcctcgcgctttcgccgcgagcaggtc
gaggggcagtcgctgctcaagtccggcatcgccacgcgcaacccggatttcaaccgcacc
atcgaacagatcgagcgggtcgccctgcgctcgaaggcccccatgctgctggtcggcccg
accggcgccggcaagtcgttcctggcccgccgcgtccatgagctcaagcgcggtcgccat
cagctgggcgggcgcttcatcgaagtgaactgcgccaccctgcgcggcgacggcgccatg
tcgaccctgttcggccatgccaaaggcgcattcaccggcgcgcagaacgcccgcgacggc
ctgctgcgcgccgccgacggcggcatgctgttcctcgatgaaatcggtgaactaggggcc
gacgaacaggccatgctgctcaaggccatcgaagaaaagcgctttttcccgctgggcgcc
gaccgcgaggttgaaagcgacttccagctgatcgccggcacccaccgcgacctgcgcgcc
aaggtcgccgacggctcgttccgcgaggacctgttcgcccgcatcaacctgtggaccttc
gccctgccgggcctggccgagcgccgcgaggacatcgagccgaacctcgatttcgagttg
cagcgccacgcccgcgaacaagggcgccaggtgcgcttcaacctcgaagccaagcgccgc
tacctggccttcgcccatgccagcgaagcgcgctgggccggcaacttccgcgagctgtcg
gcatcgatcacgcgcatggcgaccttggccgacagcgggcgcatcgacgaagtgctggtc
gaggaagaaattggtcggctgcgctatgcctggggcctggaactggcggccgagccgcta
ctggccggccgcgagctggacctgttcgaccaggtgcagctgcaggcggtgcttgaggtg
tgccgccgcgccccgagcctgtccgaggccgggcgccagctgttcgcggtgtcgcgccag
gaaaaggccaaccccaacgacgccgaccgcctgcgcaagtatctggcgcgcttcgggctg
gactggcagcagattagaggatga
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