Pseudomonas entomophila: PSEEN0693
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Entry
PSEEN0693 CDS
T00362
Symbol
recD
Name
(GenBank) exonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pen
Pseudomonas entomophila
Pathway
pen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSEEN0693 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pen03400
]
PSEEN0693 (recD)
Enzymes [BR:
pen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSEEN0693 (recD)
DNA repair and recombination proteins [BR:
pen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSEEN0693 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
AAA_11
UvrD_C_2
Helicase_RecD
SH3_13
AAA_22
Viral_helicase1
UvrD-helicase
AAA_16
SLFN-g3_helicase
TraI_hel_assoc_N
NACHT
AAA_28
T2SSE
AAA_17
PhoH
nSTAND3
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
CAK13620
UniProt:
Q1IFD4
LinkDB
All DBs
Position
708991..711066
Genome browser
AA seq
691 aa
AA seq
DB search
MSRSLDDLLPTALQAEHLSALAPLRDSQDLLALLDRWVERGWLRALDRAFVSFLEERAPG
SDPLVLLAAALASHQLGHGHVCLDLAQTLAEPDFALSLPPEGDALAGPLLLPSQLLASLD
LSTWLQRIGESALVANGDAIEQRSRPLVLSAQRLYLRRYWTYERHIDAALHERLARLQPQ
QDDLSLRLAQLFEGGTPGAEVDWQKLACALATRAGFSVITGGPGTGKTTTVVRLLGLLQA
PAVEQGRPLRIRLAAPTGKAAARLTESIGQQVERLQVADEVRAHIPTEVSTVHRLLGSRP
GSRHFRHHAGNPLPLDVLVVDEASMIDLEMMANLLDALPPNARLVLLGDKDQLASVEAGA
VLGDLCRDAEDGCYWPQTLAWLEQVGGQSLSGIGLKPGDGQRNPLAQQIVMLRHSRRFGE
GSGIGQLARLVNRQQAREARELLASKPQDVFCLTLGGEHDKRFDRLLLDGLNQGAEGPQG
YRGYLRAIGRLRPPPGTPADDPRWEHWAGEVLRSFEDFQLLCAVRKGAWGVEGLNERVAR
VLHNAGLIDSQQAWYEGRPVLVTRNDYGLGLMNGDIGIALRLPDDQGQSLLRVAFPRNDG
SGGVRFVLPSRLSEVETVFAMTVHKSQGSEFSHTALVLPDALNPVLTKELVYTGITRAKH
CFSLIEPRAGVFEESVGRKVRRVSGLMLEQV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaagcctcgatgacctgctgcccaccgcgctgcaagccgagcacctgagtgcg
ctggcgcccctgcgcgacagccaggacctgctggccctgctcgaccgttgggtggagcgc
ggctggctgcgcgccctcgaccgcgcgttcgtgagcttcctcgaagagcgtgccccgggc
agcgacccgctggtgctgctggcggcggccctggccagccatcagttgggccatggccat
gtttgcctggatctggcgcagaccctggccgagccggacttcgccttgtcgttgccacca
gaaggggatgccctggccgggccattgctgctgccttcgcaactgctggccagccttgac
ctgagcacctggctgcagcgcatcggcgaaagcgctctggtggccaatggcgacgccatc
gagcaacgctcccggccattggtgctcagtgcgcagcgcctgtacctgcgccgctactgg
acctacgagcggcatatcgacgccgccctgcatgagcgcctggcccgcctgcaaccccag
caggacgatctctcgttgcgcctggcgcagctattcgaaggcggtacgccgggtgccgag
gtggactggcagaaactggcctgcgccctggccacccgcgccgggttcagtgtcatcacc
ggtggccctggcaccggcaagaccaccaccgtggtgcgcttgctcggcctgttgcaggcg
cctgcggtggagcagggccgccccttgcgcattcgcctggcggcgcccaccggcaaggcc
gcggcacgcctgaccgagtccatcgggcaacaagtcgagcggctgcaggtggccgatgaa
gtgcgtgcgcatatccccaccgaagtgagcaccgtacaccgtctgctcggcagccgccca
ggctctcgccatttccgccaccatgcgggcaacccgctgccgctggatgtgctggtggtc
gacgaggcgtcgatgatcgacctggaaatgatggccaacctgctcgatgccctgccgccc
aatgcacggctggtgctgctgggcgacaaggaccagctggcctcggtggaagccggggcg
gtgctgggcgacctgtgccgcgacgccgaagacggttgctattggccccagaccctcgcc
tggctggagcaggtaggcgggcagtcgctgagcggcattggcttgaagccgggcgatggc
cagcgcaacccgctggcccagcagattgtcatgctgcgtcactcgcgccgcttcggcgaa
ggcagcggcattggccaactggcccgcctggtcaatcgccagcaggcccgggaggcccgt
gagctgctggcgagcaagccgcaggatgtcttctgcctgaccctcggtggcgagcacgac
aagcgcttcgaccgcctgctgctcgatggcctcaaccaaggggccgagggcccgcaaggc
tatcgcggctacctgcgcgccatcggccgcctgcgcccgccgcccggtacccccgccgac
gatccacgctgggagcactgggccggggaagtgctgcgcagcttcgaggacttccagttg
ctttgcgcagtgcgcaagggtgcctggggcgtcgagggcctgaacgagcgggtggcgcgg
gtactgcacaacgccgggctgatcgacagccagcaagcctggtacgaggggcgcccggta
ctggtgactcgcaacgactatggcctggggctgatgaacggcgacatcggcatcgccctg
cgcctgccggacgaccagggccaaagcctgctgcgggttgccttcccgcgcaacgacggc
agcggcggcgtgcgtttcgtcctgcccagccgcctcagcgaagtggagaccgtgttcgcc
atgaccgtgcacaagtcccagggctcggagttcagccacaccgcgctggtgctgcccgac
gcgctcaacccggtgctgaccaaggagctggtgtacaccggcatcacccgggccaagcat
tgcttcagcctgatcgagccacgggccggggtgttcgaggagtccgtcgggcgcaaggtc
aggcgtgtctccggtctgatgctggagcaggtgtga
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