KEGG   Pseudomonas entomophila: PSEEN1182
Entry
PSEEN1182         CDS       T00362                                 
Name
(GenBank) putative ATP-dependent DNA helicase Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pen  Pseudomonas entomophila
Brite
KEGG Orthology (KO) [BR:pen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pen03400]
    PSEEN1182
Enzymes [BR:pen01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PSEEN1182
    5.6.2.6  RNA 3'-5' helicase
     PSEEN1182
DNA repair and recombination proteins [BR:pen03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PSEEN1182
SSDB
Motif
Pfam: DEAD_assoc DEAD WHD_4th_Lhr WHD_Lhr WHD_3rd_Lhr Helicase_C ResIII Cas3-like_C_2 AAA_25 WHD_DprA WHD_2nd_Lhr HTH_9
Other DBs
NCBI-ProteinID: CAK14078
UniProt: Q1IE30
LinkDB
Position
complement(1241427..1245701)
AA seq 1424 aa
MNLPAHPHPVLELFHPAVATWFRQRFATVTEAQARAWPLIHGGQSMLLAAPTGSGKTLSA
FLAVLDELFRQGLANDGELPAQTQVVYVSPLKALSNDIHLNLEAPLEGISQSLEQLGLKV
PRITTAVRTGDTPQKERTAMRKRAPHILVTTPESLYVLLGSESGRQGLASVHTVIVDEIH
ALAGNKRGCHLALTLERLQALAGRPLRRIGLSATQRPVERVAEFLVGHKRPCAIVDIGHV
RHRDLALEVPPVPLGAVMATDVWDVVYDRLAALAREHRTTLVFVNTRRLAERLTRHLGER
LGNDAVAAHHGSLAKEYRLAAEQRLKAGELQVLVATASLELGIDIGEVDLVCQIASPGSI
AAFLQRVGRSGHQVDGVPKGRLFPTSRDDLIECVALLDCVRQGELDALHVPHAPLDVLAQ
QIVAEVSNQPWAETALFDLVRQATPYADLDNRHYQALLRMLAEGFNGRQGVRSAYLHRDA
VSGTLRGRRGSQLTALTSGGTIPETADYAVLLEPQALNIGSVNEDFAVESIAGDIFQLGN
ASYRILRVEPGRVRVEDAHGLPPTIPFWLGEAPGRSDELSAAVARLQARIDAQLQQGDSD
QVLAWLQTDYALDEDCARQLLDYLGRTWHVLGALPSQQTLVMERFFDESGGTQLIIHSPY
GSRINRAWGLALRKRFCRTFNFELQAAASEDAIVLSLSTSHSFALDEVWRYLNSRTAEPI
LVQALLDAPLFGVRWRWNAAVALALPRYVGGRKVAPQIQRMKSEDLVAAVFPDQIACLEN
IVGERQIPDHPLVEQTLDDCLHEAMDSEGWLALLRRMEAGQVRLLSRDLPAPSPLASAIL
NARPYTFLDDAPLEERRTQAVLNRRWNEVSSSDDLGALDADAIDAVQAEAWPQPTTADEM
HEALMSLGVITQTEVQANPEWDALLEALSGSGRACRLQHLWLARERQSLLMALYPAAQLE
PSLPVLPGFELNHTPDSALIELLRARLSGFGPLDLKQISTPLGLATGDCEQALARLEGEG
YVLRGHFSPGQDELQWCERHLLARIHRYTVKRLRREIEPVSLQDFMRFLFDWQHLAGETR
LRGPQAVGEVLGQLQGYPCAAATWETELLPARIKDYSPHWLDDACRSGQWAWSRLAATAS
ASTLGSTPLVLLPREHLGLWRSLAPTADPEQLGSRAQRVLQTLQEQGALFFDELTREAHL
LPSELEAALQELVGAGLASADGFSGLRSLITPAAKRSPRNSRRGHPPVSSSMAHAGRWAL
LRRGAGTVDEDQRLEHLARSLLRRYGVVCWRLLERESDVLPPWRELLRCYHRLEARGEIR
GGRFIAGLAGEQFALPEAVGLLRQVRRRALDGALVVVSACDPLNLVGSLLPGSKVPAVGG
NRLLYRDGVAVACRVAGRYEYLVEAPAAEQAQWHQHLVRQTPPP
NT seq 4275 nt   +upstreamnt  +downstreamnt
atgaacttgccagcccacccgcacccggtgctcgagctgttccacccggccgtcgccacc
tggttccgccaacgcttcgccacggtcaccgaggcccaggcccgcgcctggccgttgatc
cacggcggccagtcgatgctgctcgccgcaccgaccggctcgggcaagaccttgagcgct
ttcctcgccgtgctcgacgaactgttccgccagggcctggcgaacgacggcgaactgccg
gcgcagacccaggtggtgtacgtctcgccgctcaaagcgttgtccaacgacatccacctg
aacctcgaggcaccgcttgaaggcatcagccaaagccttgaacaacttggcctgaaggtg
ccacgcatcaccaccgccgtgcgcaccggcgacaccccgcagaaagaacgcaccgccatg
cgcaagcgggcgccgcacatcctggtgaccacgccggagtcgctttacgtgctgctgggc
tctgaatccggccgccagggcctggccagcgtgcacacagtgatcgtcgacgagatccac
gccctggccggcaacaagcgcggctgccacctggcgctcacgctcgagcgcctgcaggca
ttggccgggcggcccttgcggcgcatcggcctgtccgccacccagcgcccggtagagcgt
gtggccgagttcctggtcgggcataagcgcccctgtgccatcgtcgatatcggccatgtc
cgtcatcgcgacctggccctggaagtgccacccgtgccgctgggcgcggtgatggccacc
gacgtctgggacgtggtctacgaccgcctcgccgccctcgcccgcgagcaccgcaccacc
ctggtgttcgtcaacacccggcgcctggccgagcgcctgacccgccacctcggcgaacgc
ctgggcaacgacgccgtggccgcgcaccatggcagcctggccaaggaatatcgtctggcc
gccgagcaacggctcaaggccggagagttgcaggtgctggtggctaccgcctcgctggag
ctgggcatcgatattggcgaggtcgacctggtctgccagatcgcttcgcccggctcgatc
gccgccttcctgcaacgtgtcgggcgctccggccaccaggtcgacggcgtgcccaagggc
cgcctgttccccacctcgcgcgacgacctgatcgagtgcgtggcgctgctcgactgcgtg
cgccagggtgaactggacgccctgcatgttccccatgcaccgttggatgtgctggctcag
cagatcgtcgccgaagtcagcaaccaaccctgggccgagacggcactgttcgacctggtg
cgccaggccacgccctatgccgacctcgacaatcgccactaccaggcgctgctgcgcatg
ctcgccgagggtttcaacggtcgccagggcgtgcgtagcgcctatctgcaccgcgacgcg
gtgagcggcacgctgcgtgggcgccgaggcagccagctgaccgcgctgaccagcggcggc
accatcccggagaccgccgactacgcggtgctgctggagccccaagcgctgaacatcggc
agcgtcaacgaggatttcgcggttgaaagcattgccggcgatatcttccagctgggcaat
gcgtcctaccgcatcctgcgggtcgagcccgggcgggtgcgggtggaagatgcccatggc
ttgccgccgactatcccgttctggctgggcgaagcgcccgggcgcagcgatgagttgtcc
gccgcagtggcgcgtctgcaggcgcggatcgatgcgcaactgcaacagggtgacagcgac
caggtgctcgcctggttgcagaccgactatgcactggatgaagactgtgcccgccaactg
ctcgactacctgggccgcacctggcatgtgctcggggccctgccctcacagcagaccctg
gtgatggagcgcttcttcgacgagtccggcggcacccagctgatcatccactcgccctac
ggcagccgtatcaaccgcgcctggggcctggccctgcgcaagcgcttctgccgcaccttc
aacttcgaactgcaggcggcggcgagcgaggacgccatcgtgctgtcgctgtccaccagc
cacagcttcgcgctggacgaagtatggcgctacctcaacagccgcacggcagagccgatc
ctggtccaggcgctgctcgacgccccgctgttcggcgtgcgctggcgttggaatgcggcg
gtggccctggccctgccgcgctatgtgggcgggcgcaaggtggcgccgcagatccagcgg
atgaagagtgaggacctggtggccgccgtgtttcccgaccagatcgcctgtttggagaac
atcgtcggtgaacggcagatccccgatcatccgctggtcgaacagaccctcgacgactgc
ctgcatgaagccatggacagtgaaggctggctggccctgctgcggcgtatggaagccggc
caggtgcgcctgctcagccgcgacctgccggccccttcgccactggcctcggcgatcctc
aacgcgcgcccttataccttcctcgacgacgccccgctggaagagcgacgcacccaggca
gtgctcaaccgacgctggaacgaagtgagcagcagcgacgacctgggcgcgctggacgcc
gacgccattgacgccgtgcaggccgaggcctggccgcagccgaccactgccgatgagatg
catgaggcactgatgagcctaggggtcatcacccaaaccgaggtacaggccaatcctgaa
tgggacgccctgctggaagcactctcgggtagcgggcgcgcctgccgcttgcaacacctg
tggttagcccgcgagcgtcagagcctgctcatggcgctgtaccccgcagcccagcttgaa
cccagcctgccagtgcttccaggcttcgagctgaaccacacgccagacagcgcactgatc
gaactgctgcgtgcacgcctgagcggtttcggcccgctggacctgaaacagatcagcaca
ccattggggctggcaaccggcgactgcgagcaggccctcgcccgcctggaaggcgaaggc
tatgtattgcgcggccacttcagccctggccaagacgaactgcaatggtgcgagcggcat
ctgctcgcacgcatccaccgctacacggtcaagcgcctgcgccgggaaatcgagccggta
agcctgcaggatttcatgcggtttctgttcgactggcagcacctggcgggcgaaacccgc
ctgcgcggcccccaggcagtgggcgaagtactcggccaactgcagggctacccgtgcgcc
gccgcaacctgggaaaccgagctgctgccggcacggatcaaggactacagcccgcactgg
ctggacgatgcctgccgcagcgggcagtgggcgtggagccggctggcggccacggcctcg
gccagcaccctgggcagcacgccactggtgctgttgccacgcgagcatctcgggctgtgg
cgcagcctggccccgacagccgatcccgagcagttgggctcacgggcacagcgggtgttg
cagacgttgcaggaacagggcgcgctgttcttcgacgaactgacccgtgaggctcacctg
ctacccagtgagcttgaggcggcccttcaggaattggtcggggccggactggcaagcgcc
gatggcttcagtggcctgcgcagcctgatcaccccagcagccaagcgcagcccacgaaac
agccgtcgcgggcaccctcccgtgtccagcagcatggcccacgccgggcgctgggccttg
ctacgccggggcgcaggcaccgtggacgaagaccagcgcctcgaacatctggcgcgcagc
ctgctgcgccgctatggggtggtgtgctggcgtttgctggaacgtgaaagcgatgtgctg
ccgccctggcgtgagttgctgcgctgctatcaccggctcgaggcacgcggcgagattcgc
ggcgggcgcttcattgccgggttggcgggcgagcagttcgccttgcctgaggcagtgggg
ttgttgcggcaagtgcgcaggcgggcattggatggcgcactggtggtggtcagtgcctgc
gacccgttgaacctggtcgggagcctgttgccggggagcaaagtgccggcggttggcggc
aatcgcttgctctacagggatggcgtggccgtggcctgtcgcgtggcagggagatatgag
tatctggtggaggcacctgcagccgagcaagcgcaatggcatcaacacctggtgcgccag
acgccgcccccgtag

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