Pseudomonas entomophila: PSEEN1721
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Entry
PSEEN1721 CDS
T00362
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pen
Pseudomonas entomophila
Brite
KEGG Orthology (KO) [BR:
pen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pen03400
]
PSEEN1721 (sbcC)
DNA repair and recombination proteins [BR:
pen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSEEN1721 (sbcC)
Archaeal homologous recombinant proteins
PSEEN1721 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
AAA_15
ABC_tran
nSTAND3
AAA_18
RsgA_GTPase
MMR_HSR1
AAA_22
cobW
Motif
Other DBs
NCBI-ProteinID:
CAK14569
UniProt:
Q1ICP4
LinkDB
All DBs
Position
complement(1792132..1795776)
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPVEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR
LNDIAREAKVPDADGEIPTSDPRNLLRRGAGSGFAEVDFVGIDGCRYRARWEANRAREKA
NGKLQNSRQSLYDLDSEQLLGSGKNEYKQLVEARLGLNFEQFTRAVMLAQSEFGAFLKAD
DKERSELLEKLTNTAIYTRLGQRAFSKTRETGEVHNDLKKQAEHLLPMESEARAALDQQL
EQALQQFKADQARQRQLEQQRTWLDEQRRLQAQHTEAGKALQGAEHDWQQLAEQRLDLQR
LERLAPQRHQFHRQQTLAAQLNPLLTEIDQQQHQQNALQARTGEQEQALEAARQALAQHQ
AQHSENAPRLRQAFTAQSDLARLDKELVEQREACQHAEQAVGESQQQLQLLEDNQQRSQQ
QLAQIDAALVESEHLGSLADAWQAYLPQLKQVMLVGGRLAKGREELPGLQALASQANAQL
QTQRDTFELLFREAGAEPQALAEQIDLLGNMLQENRKQQRTVEEVARLHGRELELRQGIA
ALRERQQQAMQQRQQLITEGTAAKAELEAGEQALTLTRQLLERQRLARNTSVEELRAQLR
DGEPCPVCGSAEHPFHQPEALLHSLGRHDQAEEDAAHKRVEQLGATLVELRTQLGVVNAQ
LKDYQQQQVQLGEQLQPVVEQVQDHVLWPALAPQDDKARSAWLDGQLRRLDEEINRDEKR
QGALLALQKDAARLNQQLQAANDAQQQAQRHLEQQHQALATDEQQLEQSLIDLASVLPQD
ILQALRDDPANAFLGLDQQIALRRQQLDQRKDEQEEQQARQGQLDKLRDQQQNRQHNLQQ
LQHKLTALDEQHQLARTTLGELLGEQPTAEAWQKHMDTQLEQARATEADTAQHLQALRTQ
NLELTGELKANHQRQQALEQEHQHLQGEIAQWRGEHPELDDAGLDRLLAIDDAQLGELRQ
RLQGAEKAIEQGRVLLQEREQRLQQHATQAQADLPVETLEQALAELQQQLAAQEQHCAEL
RARQADDQRRQQAHQALAEQIDQAYRQWQRWARLNALIGSASGDVFRKIAQGYNLDLLLH
HANSQLRQLAKRYRLKRGGSALGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSDVEVCG
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccattcgcctgaagaacctggcctcgctggctggcccggtcgaaatc
gatttcaccgccgaacccctggccagtgccggtctgttcgccatcaccggccccaccggc
gctggcaagagcaccctgcttgatgccctatgcctggccctgttcggtaccgtgccacgg
ctcaatgacatcgcccgggaagccaaggtacccgatgccgacggtgaaattcccacttcc
gacccgcgcaacctgctgcgtcgcggcgccggcagcggcttcgccgaggtggacttcgtt
ggcatcgatggctgccgctaccgcgcacgctgggaagccaaccgggcccgcgagaaagcc
aacggcaagctgcagaacagccgtcagagcctttatgacctggacagcgaacaactgctg
ggcagcggcaagaacgagtacaagcagctggtcgaggcacgcctggggctgaacttcgag
cagttcacccgcgcggtgatgctggcccagagcgagttcggcgcgttcctcaaagcagat
gacaaggagcgcagcgagctactggaaaagctcaccaacaccgcgatctacacccgcctc
ggccaacgcgcgttcagcaagacccgggaaaccggcgaagtgcataacgacctgaaaaag
caggccgaacacctgctgccaatggaaagcgaagcccgcgcggccctcgaccagcaactg
gaacaggccctgcagcagttcaaggccgaccaggcgcgccagcgtcaactggaacagcaa
cgcacctggcttgatgagcagcgccgtctgcaggcccagcacactgaggctggcaaagca
ctgcaaggcgccgagcatgattggcagcaactggccgagcagcgcctggacctgcaacgc
ctggaacgcctggccccgcaacgccaccagttccaccgccagcagaccctggccgcgcaa
ttgaaccccctgctgacggagatcgatcagcagcagcaccagcaaaacgcactgcaagcc
cgcaccggcgagcaggagcaggcactggaagctgcgcgccaggccttggcccagcaccag
gcacagcacagcgaaaacgccccgcgcctgcgccaggccttcaccgcccagagcgacctg
gcccgcctcgacaaggaactggtcgagcaacgcgaggcctgccagcacgccgagcaggcc
gtcggtgaaagccagcaacagctgcaactgcttgaagacaatcagcaacgcagccagcag
caactggcgcagatcgacgccgctctggtcgagagcgagcacctgggcagcctggccgac
gcctggcaggcgtatctgccacagctcaagcaagtgatgctggtcggcgggcgcctggcc
aaaggccgtgaagaactgcccggcctgcaagcgctggccagccaggccaatgcccagttg
caaacccaacgcgacacgttcgagctgctgttccgtgaagccggggccgagccccaggcg
ctggccgagcagatcgacttgctgggcaacatgctccaggaaaatcgcaagcaacaacgc
accgtcgaggaagtcgcgcgcctgcatggtcgcgagctggaactgcgccagggtatcgcc
gcgctgcgtgaacgtcagcaacaggccatgcagcaacgccagcagctgatcaccgaaggc
accgccgccaaggccgagctggaagcgggcgaacaggccctgaccctcacccgccagttg
ctggaacgccagcgcctggcccgcaacaccagcgtcgaggaactgcgcgcccagttgcgt
gatggcgaaccctgcccggtctgcggcagcgccgagcacccgttccatcaacccgaagcc
ctgctgcacagccttggccgccatgaccaggccgaagaggacgccgcgcacaagcgtgta
gaacaactcggcgccacgctggtggaactgcgcacccagctgggcgtggtcaacgctcag
ctcaaggactatcagcagcaacaggtgcaattgggcgagcagctgcaacctgtggtcgag
caggtccaggaccacgtgctatggcccgccctcgccccgcaggacgacaaggcccgcagt
gcctggctcgatggccagttgcgccgcctggacgaagagatcaaccgcgacgagaaacgc
cagggtgccctgctcgccctgcagaaggatgcggcgcgcctcaaccagcaactgcaggct
gccaacgacgcccagcagcaagcacagcgccacctcgagcagcaacaccaggccctggcc
actgacgagcagcagcttgagcaaagcctgatcgacctcgccagcgtgctgcctcaggac
atcctccaggccctgcgcgacgacccggccaatgccttcctcggcctggaccagcagatc
gccctgcgccgacaacagctcgaccagcgcaaggacgaacaggaagaacagcaggcccgt
cagggccagctggacaagctgcgcgatcaacagcagaaccgccagcacaacctgcagcag
ctgcaacacaagctcaccgccctggatgaacaacaccagctggcacgtaccacgctgggc
gaactgctgggcgagcaacccactgccgaagcctggcaaaagcacatggacacgcagctg
gagcaggcccgcgccaccgaagcggacaccgcacagcacctccaggcattgcgcacccag
aacctggaactaaccggtgaattgaaggccaaccaccagcgccagcaagcgctggagcag
gagcaccagcacctgcagggtgaaatcgcccaatggcgcggcgagcaccccgagctggac
gacgctggcctcgatcgcctgctggccatcgacgacgctcaactgggcgaactgcgtcaa
cgcctgcaaggcgcggaaaaagccatcgagcaaggccgcgtgctgttgcaggagcgcgaa
caacgtctgcagcagcacgccacccaggcgcaagccgacttgccggttgaaacgctggag
caggcgctcgccgagctccaacagcagctggcggcccaggaacaacactgcgccgagttg
cgtgcccggcaggctgacgaccaacgccgacaacaggcccaccaggcgctggccgaacag
atcgaccaggcctatcgccagtggcaacgctgggcacgcctgaacgcattgatcggctcg
gcctcgggcgatgtgttccgcaagatcgcccagggctacaacctcgacctgctgctgcac
cacgccaacagccagctgcgccagttggcgaaacgttatcgcctcaagcgcggcggaagc
gccctgggcctgctggtgctggacaccgagatgggcgacgagctgcgttcggtgcactcg
ctgtccggcggcgaaaccttcctggtctcgctggccctggccctgggcctggcgtcgatg
gcctcgagtaccctgcgcatcgagtcgctgttcatcgacgaaggcttcggcagcctcgac
cctgagtcgctgcaactggccatggacgcccttgacggcctgcaggcccaggggcgcaag
gtggcggtgatttcccacgtgcaggagatgcacgagcgtatcccggtgcagatccaggtg
cgccgccagggcaacggcctgagcgacgtggaggtatgcgggtga
DBGET
integrated database retrieval system
