Pseudomonas entomophila: PSEEN2283
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Entry
PSEEN2283 CDS
T00362
Name
(GenBank) putative DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pen
Pseudomonas entomophila
Brite
KEGG Orthology (KO) [BR:
pen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pen03032
]
PSEEN2283
03400 DNA repair and recombination proteins [BR:
pen03400
]
PSEEN2283
Enzymes [BR:
pen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PSEEN2283
DNA replication proteins [BR:
pen03032
]
Prokaryotic type
DNA Topoisomerases
PSEEN2283
DNA repair and recombination proteins [BR:
pen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PSEEN2283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
CAK15097
UniProt:
Q1IB69
LinkDB
All DBs
Position
complement(2374609..2375619)
Genome browser
AA seq
336 aa
AA seq
DB search
MPDCPLPASLHYVDDTQPGLTRRLWRERFHYFDRQGQRIRDTETLARIAALVIPPAYTDV
WICADPQGHLQATGRDARGRKQYRYHALWRELRDQHKYDRMLAFAEALPNLRKQLDRHLA
CPGLGREKVMALVISLLDNTLIRIGNRQYLRDNRSYGLTTLATRHVRVRGSIMRFQFRGK
RGVEHDVTLRDRRLAGLLKRCIELPGQALFQYLDEQGQRHCVGSTEINQFIQQLTGADFT
AKDYRTWAGSTLALDLLKPLAWEPISEARRQVAAIVRQVAARLGNTPAVCRRCYIHPAVL
EQFQLGHLAKLPRVRQRKGLEREEVALLRFLQDLQA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactgcccgttgcctgcttcactgcattacgtcgatgacactcagcccggcctg
acgcggcgtctttggcgcgagcgctttcattacttcgacaggcaaggccagcggattcgc
gatactgaaacgctcgctcgcatcgccgcgctggtgattccgcccgcctataccgacgtg
tggatctgcgccgatccgcaggggcatctgcaggccaccgggcgtgacgcccgcgggcgc
aagcagtaccgctaccacgccctgtggcgcgaactgcgcgaccagcacaagtacgaccgc
atgctggccttcgccgaagccctgccgaacctgcgaaaacagttggatcgacacctggca
tgtcccggcctgggccgggagaaggtcatggcactggtgatcagcctgctcgacaacacg
ctgatacgcatcggtaaccgacagtaccttcgcgacaatcgctcctatggactgactacc
ctcgcgacgcgtcacgtcagggtccgtggcagcatcatgcgcttccagttccggggcaag
cgcggcgtcgagcatgacgtcacattgcgcgacaggcgcctggccgggctgctcaagcgc
tgcatcgaactacccggccaggcattgttccagtacctcgacgagcaaggacaacgtcac
tgcgtgggctcgaccgaaatcaaccagttcatccagcaactcaccggggccgacttcacg
gccaaggactatcgcacctgggcaggcagcaccctggccctcgacttgttgaaaccgctg
gcgtgggaacccatcagcgaggcccgccgccaggtggccgcgatagtccgccaggtggcg
gcccgcttgggaaacaccccggcggtctgccggcgctgctacatccaccctgccgtgctg
gaacagttccagctcgggcacctggccaagctgcctcgtgtccgccagcgcaagggcctg
gaacgggaggaagtggcactgttgcgcttcctgcaggacctgcaggcctag
DBGET
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