KEGG   Pseudomonas entomophila: PSEEN3638
Entry
PSEEN3638         CDS       T00362                                 
Symbol
lpd
Name
(GenBank) 2-oxoglutarate dehydrogenase, E3 component, lipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pen  Pseudomonas entomophila
Pathway
pen00010  Glycolysis / Gluconeogenesis
pen00020  Citrate cycle (TCA cycle)
pen00260  Glycine, serine and threonine metabolism
pen00280  Valine, leucine and isoleucine degradation
pen00310  Lysine degradation
pen00380  Tryptophan metabolism
pen00620  Pyruvate metabolism
pen00630  Glyoxylate and dicarboxylate metabolism
pen00640  Propanoate metabolism
pen00670  One carbon pool by folate
pen00785  Lipoic acid metabolism
pen01100  Metabolic pathways
pen01110  Biosynthesis of secondary metabolites
pen01120  Microbial metabolism in diverse environments
pen01200  Carbon metabolism
pen01210  2-Oxocarboxylic acid metabolism
pen01240  Biosynthesis of cofactors
Module
pen_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pen_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pen_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
pen_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pen_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pen00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PSEEN3638 (lpd)
   00020 Citrate cycle (TCA cycle)
    PSEEN3638 (lpd)
   00620 Pyruvate metabolism
    PSEEN3638 (lpd)
   00630 Glyoxylate and dicarboxylate metabolism
    PSEEN3638 (lpd)
   00640 Propanoate metabolism
    PSEEN3638 (lpd)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PSEEN3638 (lpd)
   00280 Valine, leucine and isoleucine degradation
    PSEEN3638 (lpd)
   00310 Lysine degradation
    PSEEN3638 (lpd)
   00380 Tryptophan metabolism
    PSEEN3638 (lpd)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PSEEN3638 (lpd)
   00670 One carbon pool by folate
    PSEEN3638 (lpd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pen04147]
    PSEEN3638 (lpd)
Enzymes [BR:pen01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PSEEN3638 (lpd)
Exosome [BR:pen04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PSEEN3638 (lpd)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 NAD_binding_8 FAD_oxidored HI0933_like GIDA FAD_binding_3 3HCDH_N AlaDh_PNT_C DAO Thi4 Lys_Orn_oxgnase Amino_oxidase 2-Hacid_dh_C UDPG_MGDP_dh_N DUF3373
Other DBs
NCBI-ProteinID: CAK16367
UniProt: Q1I7L2
LinkDB
Position
complement(3922309..3923745)
AA seq 478 aa
MTQKFDVVVIGAGPGGYVAAIKAAQLGFSTACIEKYTDAEGKLALGGTCLNVGCIPSKAL
LDSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQG
HGKLLAGKKVEVTKADGTTEIIEAENVILASGSRPIDIPPAPVDQNVIVDSTGALEFQSV
PKRLGVIGAGVIGLELGSVWARLGAEVTVLEALDTFLMAADTAVSKEAQKTLTKQGLDIK
LGARVTGSKVNGNEVEVTYTNAEGEQKITFDKLIVAVGRRPVTTDLLAADSGVTIDERGY
IFVDDHCATSVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTH
PEIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI
GPSAAELVQQGAIAMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHVANRKKR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgacccagaaattcgacgtggtagtgattggtgcaggtcctggcggctacgtggccgcg
atcaaggccgcacagctcggcttcagcaccgcctgcatcgagaaatacaccgacgccgag
ggcaagctggccctgggcggtacctgcctgaacgtgggttgcattccttccaaggccctg
ctggacagctcctggaagtacaaggaagccaaagagagcttcaacgtgcacggcatctcc
actggcgaagtgaagatggacgtggctgcgatggttggccgcaaggctggcatcgtcaag
aacctgaccggtggcgtcgccaccctgttcaaggccaacggcgtcacttcgatccagggc
cacggcaagctgctggccggcaagaaagtcgaagtcaccaaggctgacggcaccactgaa
atcatcgaagccgagaacgtgatcctggcctccggctcgcgtccgatcgacattccgccg
gctccggtcgaccagaacgtcatcgtcgactccaccggcgccctggaattccaatcggtt
cccaagcgcctgggcgtcatcggcgctggcgtgatcggcctggaactgggttcggtctgg
gctcgcctgggtgccgaagtcaccgtcctggaagccctggacaccttcctgatggctgcc
gacaccgctgtgtcgaaagaagcccagaaaaccctgaccaagcaaggcctggacatcaag
ctgggcgctcgcgtcaccggctcgaaagtcaacggtaacgaagtcgaagtcacctacacc
aacgccgaaggcgagcagaagatcaccttcgacaagctgatcgtcgcggtcggccgtcgt
ccggtgaccaccgacctgctggccgccgacagcggcgtgaccatcgacgagcgcggctac
atcttcgtcgacgatcactgcgccaccagcgtaccgggcgtctacgccatcggtgacgtg
gtgcgtggcatgatgctggcgcacaaggcctcggaagagggcatcatggtcgtcgagcgc
atcaagggccacaaagcccagatgaactacgacctgatcccgtcggtcatctacacccac
ccggaaatcgcgtgggtcggcaagaccgaacaggcgttgaaagccgaaggcgttgaggtt
aacgtgggcaccttcccgttcgcggccagcggccgtgcgatggcagccaacgataccggc
ggtttcgtcaaggtcatcgccgacgccaagaccgaccgcgtactgggcgttcacgtgatc
ggcccatcggctgcggagctggtgcagcagggcgcgatcgcaatggaattcggcaccagt
gccgaggacctgggcatgatggtcttcagccatccgaccctgtccgaagcgctgcatgaa
gcagcgctggcggtgaatggcggtgccattcacgtcgccaaccgtaagaagcgttaa

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