Pseudomonas entomophila: PSEEN3728
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Entry
PSEEN3728 CDS
T00362
Symbol
fadB
Name
(GenBank) fatty oxidation complex alpha subunit [Includes: Enoyl-CoA hydratase; Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase]
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pen
Pseudomonas entomophila
Pathway
pen00071
Fatty acid degradation
pen00280
Valine, leucine and isoleucine degradation
pen00310
Lysine degradation
pen00362
Benzoate degradation
pen00380
Tryptophan metabolism
pen00410
beta-Alanine metabolism
pen00640
Propanoate metabolism
pen00650
Butanoate metabolism
pen00907
Pinene, camphor and geraniol degradation
pen00930
Caprolactam degradation
pen01100
Metabolic pathways
pen01110
Biosynthesis of secondary metabolites
pen01120
Microbial metabolism in diverse environments
pen01200
Carbon metabolism
pen01212
Fatty acid metabolism
Module
pen_M00087
beta-Oxidation
pen_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PSEEN3728 (fadB)
00650 Butanoate metabolism
PSEEN3728 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PSEEN3728 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PSEEN3728 (fadB)
00310 Lysine degradation
PSEEN3728 (fadB)
00380 Tryptophan metabolism
PSEEN3728 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PSEEN3728 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PSEEN3728 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PSEEN3728 (fadB)
00930 Caprolactam degradation
PSEEN3728 (fadB)
Enzymes [BR:
pen01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PSEEN3728 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PSEEN3728 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PSEEN3728 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PSEEN3728 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
CAK16448
UniProt:
Q1I7D4
LinkDB
All DBs
Position
complement(4006380..4008527)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFSDFEDLEVPTVAAINGIALGGGLE
MCLAADYRIMSSSAKIGLPEVKLGIYPGFGGTVRLPRLIGSDNAIEWIAAGKENRAEDAL
KVGAVDAVVAPELLQAGALDLIKRAISGELDHKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLARTSVAESLIGLFLNDQEL
KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGKRVEKGRLTPAKMAEALNAIRPTLSYGDFGNVDIVVEAVVENPKVKQAVLAEVEGQVK
EDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVADASVLDVLKPVIFEQREVSDEDIINWMMVPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGPLYHATAKLREMAKNGQRFFN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagcggcatcgtcgaattg
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgccttaccctgaacgagctg
cgtcaggcagtggacgccatcaaggccgacgcttcggtcaagggcgtgatcgtcagcagc
ggcaaggacgtgttcatcgtcggcgccgacatcaccgagttcgtcgacaacttcaagctg
cccgaggccgaactggtcgccggcaacctggaagccaaccgcattttcagcgacttcgag
gacctcgaagtaccgaccgtcgccgccatcaatggcatcgccctgggcggtggcctggag
atgtgcctggcggccgactaccggatcatgtccagcagcgccaagatcggcctgccggaa
gtcaagctgggtatctacccaggcttcggcggcaccgtgcgtctgccgcgcctgatcggc
tcggacaacgccatcgagtggatcgccgccggtaaagagaaccgtgccgaagatgcgctg
aaagtcggcgccgtcgacgcggtggtcgcccctgaactgctgcaggccggcgccctggac
ctgatcaagcgcgccatcagtggcgagctggaccacaaggccaagcgccagcccaagctc
gagaagctcaagctcaacgccatcgagcagatgatggccttcgagaccgccaagggcttc
gttgccggccaggccggcccgaactacccggcaccggtcgaagccatcaagaccatccag
aaagccgccaacttcggccgtgacaaggccctggaagtcgaagccgccggcttcgccaag
ctggcccgtacttcggtcgctgaaagcctgatcggcctgttcctgaacgaccaggagctc
aagcgcaaggccaaggctcatgacgagatcgcccacgacgtgaagcaggccgccgtgctc
ggcgccggtatcatgggtggcggtatcgcctaccagtcggcggtcaagggcactccgatc
ctgatgaaggatatccgcgaggaagctatccagctgggcttgaacgaagcctccaagctg
ctcggcaagcgcgtcgagaaaggtcgcctgaccccggcgaagatggccgaggcgctcaac
gccattcgcccgaccctgtcctacggtgatttcggcaatgtcgacatcgtcgtcgaagcc
gtggtcgaaaacccgaaggtcaagcaggccgtgctggcggaagtggaagggcaggtgaag
gaagacgcgatcctcgcctccaacacctcgaccatctccatcaacctactggccaaggcg
ctcaagcgcccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtcgaagtcatccgtggcgagaagtccagtgaagtagcggtcgccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagtgccggtgtcgac
ttcgtgcgcatcgacaaggtcatggaaaagttcggctggccgatgggcccggcctacctg
atggacgtggtcggcatcgacaccggccaccatggccgcgacgtgatggccgaaggcttc
ccggaccgcatgaaggatgatcgccgctccgccgtcgatgccctgtacgaggccaaccgc
ctgggccagaagaacggcaagggcttctacgcctacgaaaccgacaagcgtggcaaaccg
aagaaagtcgccgacgccagcgtgctcgacgtgctcaagccggtcatcttcgaacagcgt
gaagtcagcgacgaagacatcatcaactggatgatggtgccgctgtgcctggaaaccgtg
cgctgcctggaagacggcatcgtcgaaaccgctgccgaagccgacatgggcctggtctac
ggcatcggtttccctcccttccgcggtggcgcgctgcgctacatcgattcgatcggggtc
gccgagttcgtcgcactggccgacaagtacgccgacctggggccgctgtaccacgccacg
gcgaagctgcgcgaaatggccaagaacggccagcgcttcttcaactga
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