Pseudomonas entomophila: PSEEN3951
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Entry
PSEEN3951 CDS
T00362
Name
(GenBank) putative ATP-dependent RNA helicase, DEAD box family
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pen
Pseudomonas entomophila
Brite
KEGG Orthology (KO) [BR:
pen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pen03009
]
PSEEN3951
Enzymes [BR:
pen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PSEEN3951
Ribosome biogenesis [BR:
pen03009
]
Prokaryotic type
rRNA helicases
PSEEN3951
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAK16656
UniProt:
Q1I6S7
LinkDB
All DBs
Position
complement(4251749..4253113)
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AA seq
454 aa
AA seq
DB search
MQLEFFALARGYAVFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTG
SGKTAAFVLPLLNRLVDLSGPRVEIRALILLPTRELAQQTLKQVQLFSQFTYIKSGLVTG
GEDFKEQAAMLRKVPDVLIGTPGRLLEQLNAGNLDLSHVKVLILDEADRMLDMGFAEDME
RLCKECENREQTLLFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQIITADHD
QHKEQIVQWLLANETYQKAIIFTNTRALADRIYGHLVAKEVKAFVLHGEKDQKDRKLAID
RFKDGGSKVLVATDVAARGLDIDGLDLVINFDMPRSGDEYVHRIGRTGRAGGEGLAISLI
THNDWNLMSSIERYLKQQFERRVIKEVKGTYSGPKKVKASGKAAGSKKKKVEKKTGTDKK
AAAKRKPAAKPKAKAPLASADGLAPLKKRKPAAE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttgaatttttcgcacttgcccgaggttacgccgtgttttcccaattcgccctg
cacgaacgcctgctcaaagccgtggccgagctgaaatttgtcgagccgacgccggtgcag
gcagcggccattcccctggcgttgcaagggcgtgacctgcgggtgacggcgcagaccggc
agcggcaagacggcggcctttgtcctgcccctgctcaatcgcctggtcgacctgagcggc
ccacgcgtggaaatccgcgcgctgatcctgctgcccacccgcgagctggcccagcagacc
ctcaagcaggtgcaactgttctcccagttcacctacatcaagtccgggctggtgacgggt
ggtgaagacttcaaggaacaggccgcgatgctgcgcaaggtaccggacgtgctgatcggc
accccgggccgcctgctcgaacagctcaatgccggcaacctcgacctttcccacgtgaag
gtgctgatcctcgacgaggccgaccgcatgctcgacatgggcttcgccgaagacatggag
cgcctgtgcaaggagtgcgagaaccgcgaacagaccctgctgttctccgccaccactggc
ggcgcggctctgcgcgacatcatcggcaaggtgctgaaggaccctgagcacctgatgctc
aacagcgtctcgcagcttgccgaaggcacccgccagcagatcatcactgccgaccacgac
cagcacaaagagcagatcgtgcagtggctgctggccaacgagacctaccagaaagcgatc
atcttcaccaacacccgggcgttggccgatcgcatctacggccacctggtggccaaagaa
gtcaaagccttcgtcctgcatggcgagaaggaccagaaagaccgcaaactggccatcgat
cgtttcaaggatggcggctccaaggtgctggtagccaccgacgtcgccgcccgtggcctg
gatatcgatggcctggacctggtgatcaacttcgacatgccgcgcagcggtgacgagtac
gtgcaccgcatcggccgtaccggccgcgccggtggcgaaggcctggcgatctcgctgatc
acccacaacgactggaacttgatgtcgagcatcgagcgctacctcaagcagcagttcgag
cgccgcgtcatcaaagaggtcaagggcacctacagcgggccgaaaaaggtcaaggcgtcg
ggcaaggcagccggcagcaagaagaaaaaggtcgagaagaagactggcaccgacaagaaa
gccgccgccaagcgcaagccggctgccaagccgaaggccaaggccccgttggccagcgcc
gacggcctggcgccgctgaaaaagcgcaagcctgcggccgagtaa
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