Pseudomonas entomophila: PSEEN4092
Help
Entry
PSEEN4092 CDS
T00362
Symbol
ruvB
Name
(GenBank) Holliday junction helicase, subunit B
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pen
Pseudomonas entomophila
Pathway
pen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSEEN4092 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pen03400
]
PSEEN4092 (ruvB)
Enzymes [BR:
pen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSEEN4092 (ruvB)
DNA repair and recombination proteins [BR:
pen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSEEN4092 (ruvB)
RecFOR pathway proteins
PSEEN4092 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
TIP49
AAA_3
Mg_chelatase
AAA_16
AAA_14
AAA_17
nSTAND3
AAA_2
RNA_helicase
Rad17
AAA_28
ABC_tran
AAA_18
NTPase_1
TsaE
AAA_24
NB-ARC
RsgA_GTPase
AAA_33
NACHT
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CAK16786
UniProt:
Q1I6E9
LinkDB
All DBs
Position
complement(4388437..4389483)
Genome browser
AA seq
348 aa
AA seq
DB search
MIETDRLIAASGRDREEVQDRAIRPLRLDEYIGQPVVREQMALFIQAARGRNESLDHTLI
FGPPGLGKTTLANIIAQEMGVSVKSTSGPILERPGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQR
LEFYSNKDLATIVSRSAGILGLPMDDKGAFEIARRARGTPRIANRLLRRVRDFAEVRGKG
EITKAVADMALNLLDVDERGFDHSDRRLLLTMIEKFDGGPVGLDNIAAAIGEERHTIEDV
LEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPGRFCEGGEYAAQDDE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaaaccgaccgcctgatcgccgccagtggccgcgaccgtgaagaagtccaggac
cgcgcgatccgcccgctgcgcctggacgagtacatcggccagccggtggtgcgcgagcag
atggcactgttcatccaggccgcgcgcgggcgcaatgagtcgctcgaccataccctgatc
ttcggcccgccaggcttgggcaagacaaccctggccaacatcatcgcccaggagatgggt
gtgtcggtcaagagcacctcgggcccgatcctcgagcgcccgggcgacctggcggcgatg
ctgaccaacctcgagccccatgacgtgctgttcattgacgagatccaccggttgtcgccg
gtggtggaggaggtgctctatccggcgatggaggacttccagctggacatcatgatcggc
gagggcccggctgcgcgctcgatcaagctcgacctgccgccgttcaccctggtcggtgcc
accacccgtgccggcatgctgaccaacccgctgcgcgaccgcttcggtatcgtccagcgc
ctggagttctacagcaacaaggacctggccaccatcgtcagccgttcggccggtattctc
gggctgccgatggacgacaagggcgccttcgagatcgcccgccgggcgcggggcacgcca
cggatcgccaatcgcctgctgcggcgggtgcgcgacttcgccgaggtgcgtggcaagggc
gagatcaccaaggcggtcgccgacatggcgctgaacctgctggatgtcgacgagcgtggc
ttcgatcactccgaccggcgtctgctgctgaccatgatcgagaagttcgatggtgggccg
gtggggctcgacaacattgccgcagcgatcggcgaagagcgccacaccatcgaggacgtg
ctcgagccttatttgatccagcagggctatatcatgcgcaccccgcggggccgcgtggtc
acccggcatgcctacctgcatttcggcctgaatatccccgggcgcttctgcgaaggtggc
gaatatgccgcccaggacgacgaatga
DBGET
integrated database retrieval system
