Pseudomonas entomophila: PSEEN4244
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Entry
PSEEN4244 CDS
T00362
Symbol
recJ
Name
(GenBank) ss DNA specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pen
Pseudomonas entomophila
Pathway
pen03410
Base excision repair
pen03430
Mismatch repair
pen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSEEN4244 (recJ)
03430 Mismatch repair
PSEEN4244 (recJ)
03440 Homologous recombination
PSEEN4244 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pen03400
]
PSEEN4244 (recJ)
DNA repair and recombination proteins [BR:
pen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PSEEN4244 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSEEN4244 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PSEEN4244 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
CAK16932
UniProt:
Q1I603
LinkDB
All DBs
Position
complement(4531885..4533594)
Genome browser
AA seq
569 aa
AA seq
DB search
MRIEPRPLPSTLPFLGNLPPLLTRLYAARGVQSETELDKGLARLLPFQQLKGIDAAVDLL
VEALDQRQRILIVGDFDADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVQV
ALERQPQLLITVDNGISSVDGVAAAKAAGLRVLVTDHHLPGEQLPDADAIVNPNQPGCEF
PSKSLAGVGVIFYVLMALRARLRSLGRYETQAQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGLKAILEVARRDHRRITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLCEDAALALDMAQELDGLNQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFDADWHQG
VIGILASRLKERYHRPTIAFADAGEGMLKGSARSVAGFHIRDALDAVAARYPSLISKFGG
HAMAAGLSLPADNFPAFAEAFDAEVRRQLREEDLTGRLLSDGSLAVEEFHLELARALRNA
GPWGQHFPEPLFHGVFQLVSQRVVGERHLKVVLKSECGAVTLDGIAFGVDREVWPNPTVR
WVELAYKLDVNEFRGNESVQLMIAHMEAR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaacctcgtcccctgccgtcgaccctgccgtttctgggtaacctgccgcct
ttgctgacccgcctgtatgccgcccgtggcgttcagtcggaaaccgagttggacaagggc
ctggcgcgtttgttgccgttccagcagctcaaaggtatcgatgcggcggtggacctgctg
gtcgaggccctcgaccagcgccagcggattctcattgtcggcgatttcgacgccgacggt
gccaccgccagcacggtgggggtgctgggcctgcgtctgctgggcgcggcccacgtcgat
tacctggtacccaaccgattcgagtatggttacggcctgacgcccgagatcgtccaggtt
gcgctggagcgtcagccgcagctattgatcaccgtggataacggcatttccagtgtcgac
ggtgtggcggccgccaaggctgcggggttgagggtgctggtcaccgaccaccacttgcct
ggcgagcagttgccggatgccgatgccatcgtcaacccgaaccagcctggttgcgagttc
ccgagcaagtcgctggcgggcgtcggggtgatcttctatgtgctgatggccctgcgcgcg
cgcctgcgcagcctcgggcgctacgaaacgcaggcgcagccgaacatcggcgaactgctc
gatctggttgcgttgggcagtgtcgccgacgtggtgccgctggatgccaacaaccgcatc
ctggtgcaccaggggctcgagcgtatccgcgccggccgtgcgcggcctgggctcaaggcc
attctcgaggtggcccggcgtgaccatcggcgtatcacctccaccgacctgggcttcatt
ctcggccctcggctcaatgcagccggccgactggatgacatgagcctcggcattgaatgc
ctgctgtgcgaggacgctgcgctggcgctagacatggcccaggagctggatggcctgaac
caggaccgcaagtccatcgagcagggcatgcagcgcgaggcgctggcccagctcaaggat
ctgccggtggagtccatgccctatgggctttgcctgttcgacgctgactggcaccagggg
gtgatcgggattctggcgtcacgcctgaaggagcgttaccaccgcccgaccatcgccttt
gccgatgcgggggaggggatgctcaagggctcggcgcggtcggtggcgggcttccatatt
cgcgatgcgctggatgcggtggcggcgcgatatccgtcgttgatcagcaagtttggtggg
catgcgatggccgctgggttgtcgttgcctgccgacaacttcccggcgtttgccgaggcc
ttcgatgcggaggtgcggcggcagttgcgtgaggaggacctgacggggcggttgctgtcg
gatggctcgctggcggtcgaggagtttcacctggagctggcgcgggccttgcgtaatgcc
gggccttgggggcagcacttccctgaaccattgttccatggggtgtttcagctggtctcg
cagcgggtcgtgggggagcggcatctcaaggtcgtgctcaagagcgagtgtggggcggtg
acgctggatgggattgcctttggggtggatcgggaggtttggccgaatcctacagtgcgg
tgggtggagttggcctacaagctggatgtgaatgagtttcgggggaatgagagtgtgcag
ttgatgattgcgcatatggaagcgcggtga
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integrated database retrieval system
