Pseudomonas entomophila: PSEEN4388
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Entry
PSEEN4388 CDS
T00362
Name
(GenBank) putative periplasmic binding domain/transglycosylase SLT domain fusion protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
pen
Pseudomonas entomophila
Brite
KEGG Orthology (KO) [BR:
pen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pen01011
]
PSEEN4388
Enzymes [BR:
pen01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PSEEN4388
Peptidoglycan biosynthesis and degradation proteins [BR:
pen01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PSEEN4388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
CAK17072
UniProt:
Q1I5L3
LinkDB
All DBs
Position
4684960..4686351
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AA seq
463 aa
AA seq
DB search
MLGACVEKPSTLERVKEDGVLRVITRNSPATYFQDRNGETGFEYELVKRFADDLGVKLQI
ETADNLDELFDQLGKPSGPVLAAAGLVSSERRGAQARFSHPYLEVTPQVIYRNGRSRPTN
AKGLVGKKIMVLKGSSHADQLAELKKQNPGLEYEESDAVEVVDLLRMVDEGQIDLTLVDS
NELAMNQVYFPNVRVAFDLGDTRDQRWAVAAGDDNSLLNEINEFLDKSQKNGTLQRLKDR
YYGHVDVLGYVGAYTFAQHLQQRLPKYEKHFKATSKVEQVDWRLLAAIGYQESMWQPEVT
SKTGVRGLMMLTQRTAQAMGVSNRLDPKQSIQGGAKYFMVVKDQLDDSIKEPDRTWFALA
AYNVGSGHLEDARTLAKREGLNPNKWLDVKKMLPRLSQKQWYSKTKYGYARGGEPVHFVA
NIRRYYDILTWVTQPQLEGQVAEGNLHVPGVNKDKPAEQSPQM
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgctcggtgcctgcgttgaaaaacccagcaccctcgaacgcgtcaaggaggatggcgtg
ctgcgcgtgataacccgcaacagcccggccacctacttccaggaccgcaacggcgaaacc
ggtttcgaatacgaactggtcaagcgcttcgccgacgacctgggcgtgaaactgcagatc
gagaccgccgacaacctcgacgaactgttcgaccagctgggcaaaccgtccggcccggtg
ctggcggccgccggtctggtcagcagcgaacggcgtggtgcacaggccaggttctcccac
ccctatctcgaagtcacgccgcaggtcatctaccgcaatggccgctcgcggcctaccaac
gccaaaggcctggtgggcaagaagatcatggtgctcaagggcagcagccacgccgaccag
ctcgccgaactgaaaaagcagaacccagggcttgaatacgaagagtccgacgccgtcgaa
gtggtcgatctgttgcgcatggtcgacgagggccagatcgacctgaccctggtcgactcc
aacgaactggccatgaaccaggtctacttccccaacgtacgggtggctttcgacctgggc
gacacccgcgaccaacgctgggccgtggccgccggcgacgacaacagcctgctcaacgag
atcaacgagtttctcgacaagtcgcagaagaacggcaccctgcaacgcctgaaggaccgc
tactacgggcatgtcgacgtgctcggctacgtcggtgcctacaccttcgcccagcacctt
cagcagcgcctgcccaagtacgaaaagcacttcaaggcaacatcgaaagtcgagcaggtc
gattggcgcctgctggccgccatcggctaccaggagtcgatgtggcaaccggaggtcacc
tccaagactggcgtacgcggcctgatgatgctcacccagcgcaccgcgcaggccatgggc
gtatcgaaccggctggaccccaagcaaagcatccagggcggcgccaagtacttcatggtg
gtcaaggaccagctcgacgacagcatcaaggagccggaccgcacctggttcgccctggcc
gcctacaacgtcggcagcggccacctggaagacgcccgtaccctggccaagcgcgaaggc
ctgaacccgaacaaatggctggacgtgaagaagatgctgccgcgcctgtcgcagaagcag
tggtacagcaaaacgaaatatggctacgcccgtggcggcgaaccggtgcacttcgtggcc
aacatccgtcgctactacgacatcctcacctgggtgacgcagccgcagctcgaaggccag
gtggccgagggcaacctgcatgtgccgggggtgaacaaggacaagccggcggagcagtcg
ccacagatgtaa
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