Pseudomonas entomophila: PSEEN4397
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Entry
PSEEN4397 CDS
T00362
Symbol
xseA
Name
(GenBank) exonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pen
Pseudomonas entomophila
Pathway
pen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PSEEN4397 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pen03400
]
PSEEN4397 (xseA)
Enzymes [BR:
pen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PSEEN4397 (xseA)
DNA repair and recombination proteins [BR:
pen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PSEEN4397 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CAK17081
UniProt:
Q1I5K4
LinkDB
All DBs
Position
4697297..4698676
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AA seq
459 aa
AA seq
DB search
MIKDPFERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNLARPASGHMYFTLKDS
GAQIRCALFRQNALRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAF
EALKEKLGAEGLFSTERKRPLPAHPQRIGIITSPTGAVIRDIISVFRRRAPQVELNLIPT
AVQGREAINQIVRALQMADRQGFDALILARGGGSLEDLWCFNEEAVARAVAACVTPIVSA
VGHETDVSISDFVADVRAPTPSAAAELLAPDSSGLQQRLDSLQRRLLLRMQSRLAHDRLR
VEGLARRLRHPGERLRQQAQRLDDLDMRLRRAFALNMNQRHERLGRLDTRLAAQHPGRSL
KLLKQRLDSLAERLPKAMRDVLKDRRQRFQAQLQTLQVVSPLATLARGYSILLDEHGQAI
RSAAQTHNGQRLTARLNEGELKVRVEDNHQTPVTLSLLD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagaccccttcgaacgactcggcctggaccgcgaggtcctcaccgtcagccag
ctcaacggccgcgcccgcgtgctgctggaggatgtgttccgcagtgtctgggtggaaggc
gagatatccaacctcgcccgcccggcctccgggcacatgtacttcaccctcaaggacagc
ggcgcgcagatccgttgcgcactgttccggcagaacgccctgcgcgtgcgccaggccctg
cgcgacggcctggcggtgcgggtgcgtggcaaggtctcgctgttcgaagggcgcggcgac
taccagctgatcctcgacaccgtcgagcccgccggcgacggcgccctgcgcctggccttc
gaagccttgaaggaaaagcttggcgccgaggggttgttcagcaccgagcgcaagcggccg
ttacccgcgcacccgcagcgcatcggcatcatcacctcgcccaccggcgcggtgatccgc
gacatcatcagcgtgttccgccgccgcgcgccacaggtcgaactcaacctgatccccacc
gccgtgcagggtcgcgaggccatcaaccagatcgtccgcgccctgcagatggccgaccgg
caaggcttcgacgcactgatcctggcccgtggcggcggctcgctggaagacctctggtgc
ttcaacgaagaagccgtggcccgtgccgtggccgcttgtgtcacgccgatcgtcagcgcc
gtgggccatgagaccgatgtgtcgatcagcgacttcgtcgccgacgtgcgcgcgcctacg
ccatccgccgccgccgaactgctcgcccccgacagcagcggcctgcaacagcgcctcgac
agcctgcagcggcgcctgttgctgcgcatgcagagccgcctggcccacgaccgcctgcgg
gtcgagggcctggcccggcgcctgcgccacccgggcgagcgcctgcgccagcaggcccag
cgcctggacgacctggacatgcgcctgcgccgcgccttcgcgctgaacatgaaccaacgc
cacgaacgcctcggccgcctggacacacgcctggccgcgcaacaccccgggcgcagcctg
aaactgctgaagcagcgcctggacagcctcgccgaacgcctgcccaaggccatgcgcgac
gtgctcaaggaccgccgccagcgcttccaggcgcagctgcagaccttgcaggtcgtcagc
ccgctggccaccctcgcccgcggctacagcatcctgctcgacgaacacggccaggccatc
cgcagcgccgcccagacccacaacggccagcgcctgaccgcccgcctcaacgaaggcgag
ctcaaggtgcgggtcgaggacaaccaccagaccccggtcaccctctcgctactggactga
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