Pseudomonas entomophila: PSEEN4680
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Entry
PSEEN4680 CDS
T00362
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pen
Pseudomonas entomophila
Brite
KEGG Orthology (KO) [BR:
pen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pen03009
]
PSEEN4680 (rluD)
Enzymes [BR:
pen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
PSEEN4680 (rluD)
Ribosome biogenesis [BR:
pen03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PSEEN4680 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CAK17349
UniProt:
Q1I4T7
LinkDB
All DBs
Position
complement(4980408..4981370)
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AA seq
320 aa
AA seq
DB search
MSEIIQLSAEVPSELGGQRLDQVAAQLFSEYSRSRLSSWIKDGRLTVDGAVLRPRDTVHS
GSILALEAEQEAQGEWVAQDIELDIVYEDDQILVINKPAGLVVHPAAGHPDGTLLNALLH
HVPDIINVPRAGIVHRLDKDTTGLMVVAKTLQAQTNLVDQLQKRSVSRIYECIVVGVVIA
GGKIDAPIGRHGGERQRMAVTDGGKPAVSHYRVLKRFRSHTHVRVKLETGRTHQIRVHMA
HVGYPLVGDQTYGVRFRIPPAASVAMVEAVKNFPRQALHARFLALDHPTTGERMEWASPL
PDDFLWLLSLLNDDRESFIG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagatcattcaacttagcgcagaggtcccgtccgaactgggcggccaacgcctc
gaccaggtcgccgcccaattgttctccgagtactcgcgctcgcgcctgtcctcgtggatc
aaagatggccgtttgaccgtcgatggcgcggtgctgcggccgcgcgacaccgtccacagt
ggctccatcctggccctcgaggccgagcaggaagcccagggcgaatgggtggcccaggac
atcgagctggacatcgtctatgaagacgaccagatcctggtgatcaacaagcccgccggg
ctggtggtgcacccggcggccggccacccggacggcaccctgctcaatgccctgctgcac
catgtgccggacatcatcaacgtaccgcgcgccggtatcgtgcaccgtctggacaaggac
accaccggcctgatggtggtggccaagaccctgcaggcgcaaaccaatctggtcgaccag
ctgcagaagcgctcggtcagccgcatctacgagtgcatcgtggtcggcgtggtgatcgcc
ggtggcaagatcgacgccccgatcggccgccacggtggcgagcgccagcgcatggcggtc
actgacggcggcaagccggccgtcagccactaccgcgtgctcaagcgcttccgctcgcac
acccatgtgcgggtcaagctggaaaccggccgtacccaccagatccgcgtgcacatggcg
catgtcggttatccgttggtcggcgaccagacctatggcgtgcgcttccgcattccgccg
gccgccagcgtggccatggtcgaggcggtgaagaacttcccgcgccaggccctgcatgcg
cgcttcctggcgctggaccacccgaccaccggtgaacgcatggaatgggcctcgccgctg
ccggacgatttcctctggctgttgtcgctgctcaacgacgaccgcgagagctttatcgga
tga
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